LOCUS BC039862 1250 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens outer dense fiber of sperm tails 3-like 1, mRNA (cDNA
clone MGC:48986 IMAGE:5744333), complete cds.
ACCESSION BC039862
VERSION BC039862.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1250)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1250)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: k Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31343527.
FEATURES Location/Qualifiers
source 1..1250
/db_xref="H-InvDB:HIT000052275"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48986 IMAGE:5744333"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1250
/gene="ODF3L1"
/gene_synonym="MGC48986"
/db_xref="GeneID:161753"
/db_xref="HGNC:HGNC:28735"
CDS 223..1047
/gene="ODF3L1"
/gene_synonym="MGC48986"
/codon_start=1
/product="outer dense fiber of sperm tails 3-like 1"
/protein_id="AAH39862.1"
/db_xref="GeneID:161753"
/db_xref="HGNC:HGNC:28735"
/translation="MKLPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPA
KYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGMSSC
PQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQ
YQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPT
YSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDIRD"
BASE COUNT 310 a 409 c 293 g 238 t
ORIGIN
1 ccaagctctg ccgtgacgtc atctccagct ccagcctgct ggggcctgtg ctgactgtgc
61 cccagacagc cttagctgct caagctggag aactgtcttc cttcccagct tcctccgtgt
121 ctggggtggg ggatgggggg gtctcaggca gggatactct agccccttga ctgctgttta
181 gaccctgctg tagctgctgc tgctccctgc ccagccccag ccatgaaact gcccaagggg
241 accaggagct ctgtgtactt tgcacagcac ccagaaaagg agccattgcc ctcaaggcag
301 gaggtcaagc agacccctgt catcatggcc aagatcaaag gtccggggcc cgccaagtac
361 ctccggccat cctgcacggg ctacatagat catgacatct ccatgttcaa ggcaccagct
421 tataccctgc atagccggca ctcagagaag cggatggtgt gccacagcag ccctgggcct
481 tgctatctct tggatcccaa aataactcgg tttggaatgt ccagctgccc gcaggtcccc
541 atggaggagc gcatctccaa cctgcgcctg aaccccaccc tcgcatcctg ccagtactac
601 tttgagaaga tccacccacc gggggaacgc agggctcccc agtacacgtt tggctaccgg
661 cgcccataca gagtgatgga cctcaacccg gctcccaacc agtaccagat gccactcttg
721 ctggggccca acacccctgt cagccgagct gctccctgct acagtctggc ctccagggac
781 aagaactggt tctacaagga ggatgtggca ggaggccctg gacctaccac gtacgcccga
841 cctgagccat ccatctatca gaaccgcagc cctacttaca gcatggccaa gcgcttcgcc
901 taccctctgg acctcacgcc acggcctggc cccggctccc acgaggtcca gcaggtcact
961 gtgcacaagc cccacatccc tgctttcacc atgggcatca agcactcact ccacctgtgc
1021 ccactggtca tcgacattcg tgactgaggc ccctcttggg gcactcactg cccctcatcc
1081 ccagaaatta tttttctaca ccaaattgag caatttgacc aagatttcta gtagcagagc
1141 cggtacctgc tgagtgtccg gcacacagaa gacattagag atacattttc atgcaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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