LOCUS BC039580 3017 bp mRNA linear HUM 12-OCT-2004
DEFINITION Homo sapiens poly (ADP-ribose) polymerase family, member 9, mRNA
(cDNA clone MGC:48722 IMAGE:5416494), complete cds.
ACCESSION BC039580
VERSION BC039580.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3017)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3017)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13899296.
FEATURES Location/Qualifiers
source 1..3017
/db_xref="H-InvDB:HIT000052212"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48722 IMAGE:5416494"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3017
/gene="PARP9"
/gene_synonym="BAL"
/gene_synonym="MGC:7868"
/db_xref="GeneID:83666"
CDS 104..2563
/gene="PARP9"
/gene_synonym="BAL"
/gene_synonym="MGC:7868"
/codon_start=1
/product="PARP9 protein"
/protein_id="AAH39580.1"
/db_xref="GeneID:83666"
/translation="MDFSMVAGAAAYNEKSETGALGENYSWQIPINHNDFKILKNNER
QLCEVLQNKFGCISTLVSPVQEGNSKSLQVFRKMLTPRIELSVWKDDLTTHAVDAVVN
AANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAGEIAVTGAGRLPCKQIIH
AVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPALSSGIFQFPLNLCTK
TIVETIRVSLQGKPMMSNLKEIHLVSNEDPTVAAFKAASEFILGKSELGQETTPSFNA
MVVNNLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKA
KQFQRSQLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHAMKECLEKCIEQNITSISF
PALGTGNMEIKKETAAEILFDEVLTFAKDHVKHQLTVKFVIFPTDLEIYKAFSSEMAK
RSKMLSLNNYSVPQSTREEKRENGLEARSPAINLMGFNVEEMYEAHAWIQRILSLQNH
HIIENNHILYLGRKEHDILSQLQKTSSVSITEIISPGRTELEIEGARADLIEVVMNIE
DMLCKVQEEMARKKERGLWRSLGQWTIQQQKTQDEMKENIIFLKCPVPPTQELLDQKK
QFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSHRLFQQVPYQFCNVVCR
VGFQRMYSTPCDPKYGAGIYFTKNLKNLAEKAKKISAADKLIYVFEAEVLTGFFCQGH
PLNIVPPPLSPGAIDGHDSVVDNVSSPETFVIFSGMQAIPQYLWTCTQEYVQSQDYSS
GPMRPFAQHPWRGFASGSPVD"
BASE COUNT 949 a 582 c 690 g 796 t
ORIGIN
1 gagcggcctg ccggaagtgg gccaccatat ctggaaacta cagtctatgc tttgaagcgc
61 aaaagggaat aaacatttaa agactccccc ggggacctgg aggatggact tttccatggt
121 ggccggagca gcagcttaca atgaaaaatc agagactggt gctcttggag aaaactatag
181 ttggcaaatt cccattaacc acaatgactt caaaatttta aaaaataatg agcgtcagct
241 gtgtgaagtc ctccagaata agtttggctg tatctctacc ctggtctctc cagttcagga
301 aggcaacagc aaatctctgc aagtgttcag aaaaatgctg actcctagga tagagttatc
361 agtctggaaa gatgacctca ccacacatgc tgttgatgct gtggtgaatg cagccaatga
421 agatcttctg catgggggag gcctggccct ggccctggta aaagctggtg gatttgaaat
481 ccaagaagag agcaaacagt ttgttgccag atatggtaaa gtgtcagctg gtgagatagc
541 tgtcacggga gcagggaggc ttccctgcaa acagatcatc catgctgttg ggcctcggtg
601 gatggaatgg gataaacagg gatgtactgg aaagctgcag agggccattg taagtattct
661 gaattatgtc atctataaaa atactcacat taagacagta gcaattccag ccttgagctc
721 tgggattttt cagttccctc tgaatttgtg tacaaagact attgtagaga ctatccgggt
781 tagtttgcaa gggaagccaa tgatgagtaa tttgaaagaa attcacctgg tgagcaatga
841 ggaccctact gttgctgcct ttaaagctgc ttcagaattc atcctaggga agagtgagct
901 gggacaagaa accacccctt ctttcaatgc aatggtcgtg aacaacctga ccctccagat
961 tgtccagggc cacattgaat ggcagacggc agatgtaatt gttaattctg taaacccaca
1021 tgatattaca gttggacctg tggcaaagtc aattctacaa caagcaggag ttgaaatgaa
1081 atcggaattt cttgccacaa aggctaaaca gtttcaacgg tcccagttgg tactggtcac
1141 aaaaggattt aacttgttct gtaaatatat ataccatgta ctgtggcatt cagaatttcc
1201 taaacctcag atattaaaac atgcaatgaa ggagtgtttg gaaaaatgca ttgagcaaaa
1261 tataacttcc atttcctttc ctgcccttgg gactggaaac atggaaataa agaaggaaac
1321 agcagcagag attttgtttg atgaagtttt aacatttgcc aaagaccatg taaaacacca
1381 gttaactgta aaatttgtga tctttccaac agatttggag atatataagg ctttcagttc
1441 tgaaatggca aagaggtcca agatgctgag tttgaacaat tacagtgtcc cccagtcaac
1501 cagagaggag aaaagagaaa atgggcttga agctagatct cctgccatca atctgatggg
1561 attcaacgtg gaagagatgt atgaggccca cgcatggatc caaagaatcc tgagtctcca
1621 gaaccaccac atcattgaga ataatcatat tctgtacctt gggagaaagg aacatgacat
1681 tttgtctcag cttcagaaaa cttcaagtgt ctccatcaca gaaattatca gcccaggaag
1741 gacagagtta gagattgaag gagcccgggc tgacctcatt gaggtggtta tgaacattga
1801 agatatgctt tgtaaagtac aggaggaaat ggcaaggaaa aaggagcgag gcctttggcg
1861 ctcgttagga cagtggacta ttcagcaaca aaaaacccaa gacgaaatga aagaaaatat
1921 catatttctg aaatgtcctg tgcctccaac tcaagagctt ctagatcaaa agaaacagtt
1981 tgaaaaatgt ggtttgcagg ttctaaaggt ggagaagata gacaatgagg tccttatggc
2041 tgcctttcaa agaaagaaga aaatgatgga agaaaaactg cacaggcaac ctgtgagcca
2101 taggctgttt cagcaagtcc cataccagtt ctgcaatgtg gtatgcagag ttggctttca
2161 aagaatgtac tcgacacctt gcgatccaaa atacggagct ggcatatact tcaccaagaa
2221 cctcaaaaac ctggcagaga aggccaagaa aatctctgct gcagataagc tgatctatgt
2281 gtttgaggct gaagtactca caggcttctt ctgccaggga catccgttaa atattgttcc
2341 cccaccactg agtcctggag ctatagatgg tcatgacagt gtggttgaca atgtctccag
2401 ccctgaaacc tttgttattt ttagtggcat gcaggctata cctcagtatt tgtggacatg
2461 cacccaggaa tatgtacagt cacaagatta ctcatcagga ccaatgagac cctttgcaca
2521 gcatccttgg aggggattcg caagtggcag ccctgttgat taatctctac atcattttaa
2581 cagctggtat ggccttacct tgggtgaact aaccaaataa tgaccatcga tggctcaaag
2641 agtggcttga atatatccca tgggttatct gtatggactg actgggttat tgaaaggact
2701 agccacatac tagcatctta gtgcctttat ctgtctttat gtcttggggt tggggtaggt
2761 agataccaaa tgaaacactt tcaggacctt ccttcctctt gcagttgttc tttaatctcc
2821 tttactagag gagataaata ttttgcatat aatgaagaaa tttttctagt atataacgca
2881 ggccttttat tttctaaaat gatgatagta taaaaatgtt aggataacag aatgatttta
2941 gattttccag agaatattat aaagtgcttt aggtatgaaa ataaatcatc tttgtctgat
3001 taaaaaaaaa aaaaaaa
//