LOCUS BC038982 948 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens immunoglobulin J polypeptide, linker protein for
immunoglobulin alpha and mu polypeptides, mRNA (cDNA clone
MGC:47785 IMAGE:5755337), complete cds.
ACCESSION BC038982
VERSION BC038982.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32189367.
FEATURES Location/Qualifiers
source 1..948
/db_xref="H-InvDB:HIT000052104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47785 IMAGE:5755337"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..948
/gene="IGJ"
/gene_synonym="IGCJ"
/gene_synonym="JCH"
/db_xref="GeneID:3512"
/db_xref="HGNC:HGNC:5713"
/db_xref="MIM:147790"
CDS 58..537
/gene="IGJ"
/gene_synonym="IGCJ"
/gene_synonym="JCH"
/codon_start=1
/product="immunoglobulin J polypeptide, linker protein for
immunoglobulin alpha and mu polypeptides"
/protein_id="AAH38982.1"
/db_xref="GeneID:3512"
/db_xref="HGNC:HGNC:5713"
/db_xref="MIM:147790"
/translation="MKNHLLFWGVLAVFIKAVHVKAQEDERIVLVDNKCKCARITSRI
IRSSEDPNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELD
NQIVTATQSNICDEDSATETCYTYDRNKCYTAVVPLVYGGETKMVETALTPDACYPD"
BASE COUNT 326 a 178 c 173 g 271 t
ORIGIN
1 cacacacctt aaccctgact ttttttgctc cagtttttca gaagaagtga agtcaagatg
61 aagaaccatt tgcttttctg gggagtcctg gcggttttta ttaaggctgt tcatgtgaaa
121 gcccaagaag atgaaaggat tgttcttgtt gacaacaaat gtaagtgtgc ccggattact
181 tccaggatca tccgttcttc cgaagatcct aatgaggaca ttgtggagag aaacatccga
241 attattgttc ctctgaacaa cagggagaat atctctgatc ccacctcacc attgagaacc
301 agatttgtgt accatttgtc tgacctctgt aaaaaatgtg atcctacaga agtggagctg
361 gataatcaga tagttactgc tacccagagc aatatctgtg atgaagacag tgctacagag
421 acctgctaca cttatgacag aaacaagtgc tacacagctg tggtcccact cgtatatggt
481 ggtgagacca aaatggtgga aacagcctta accccagatg cctgctatcc tgactaattt
541 aagtcattgc tgactgcata gctctttttc ttgagaggct ctccattttg attcagaaag
601 ttagcatatt tattaccaat gaatttgaaa ccagggcttt tttttttttt ttgggtgatg
661 taaaaccaac tccctgccac caaaataatt aaaatagtca cattgttatc tttattaggt
721 aatcacttct taattatatg ttcatactct aagtatcaaa atcttccaat tatcatgctc
781 acctgaaaga ggtatgctct cttaggaata cagtttctag cattaaacaa ataaacaagg
841 ggagaaaata aaactcaagg agtgaaaatc aggaggtgta ataaaatgtt cctcgcattc
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//