LOCUS BC038982 948 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides, mRNA (cDNA clone MGC:47785 IMAGE:5755337), complete cds. ACCESSION BC038982 VERSION BC038982.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 948) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 948) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: k Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32189367. FEATURES Location/Qualifiers source 1..948 /db_xref="H-InvDB:HIT000052104" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47785 IMAGE:5755337" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..948 /gene="IGJ" /gene_synonym="IGCJ" /gene_synonym="JCH" /db_xref="GeneID:3512" /db_xref="HGNC:HGNC:5713" /db_xref="MIM:147790" CDS 58..537 /gene="IGJ" /gene_synonym="IGCJ" /gene_synonym="JCH" /codon_start=1 /product="immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides" /protein_id="AAH38982.1" /db_xref="GeneID:3512" /db_xref="HGNC:HGNC:5713" /db_xref="MIM:147790" /translation="MKNHLLFWGVLAVFIKAVHVKAQEDERIVLVDNKCKCARITSRI IRSSEDPNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELD NQIVTATQSNICDEDSATETCYTYDRNKCYTAVVPLVYGGETKMVETALTPDACYPD" BASE COUNT 326 a 178 c 173 g 271 t ORIGIN 1 cacacacctt aaccctgact ttttttgctc cagtttttca gaagaagtga agtcaagatg 61 aagaaccatt tgcttttctg gggagtcctg gcggttttta ttaaggctgt tcatgtgaaa 121 gcccaagaag atgaaaggat tgttcttgtt gacaacaaat gtaagtgtgc ccggattact 181 tccaggatca tccgttcttc cgaagatcct aatgaggaca ttgtggagag aaacatccga 241 attattgttc ctctgaacaa cagggagaat atctctgatc ccacctcacc attgagaacc 301 agatttgtgt accatttgtc tgacctctgt aaaaaatgtg atcctacaga agtggagctg 361 gataatcaga tagttactgc tacccagagc aatatctgtg atgaagacag tgctacagag 421 acctgctaca cttatgacag aaacaagtgc tacacagctg tggtcccact cgtatatggt 481 ggtgagacca aaatggtgga aacagcctta accccagatg cctgctatcc tgactaattt 541 aagtcattgc tgactgcata gctctttttc ttgagaggct ctccattttg attcagaaag 601 ttagcatatt tattaccaat gaatttgaaa ccagggcttt tttttttttt ttgggtgatg 661 taaaaccaac tccctgccac caaaataatt aaaatagtca cattgttatc tttattaggt 721 aatcacttct taattatatg ttcatactct aagtatcaaa atcttccaat tatcatgctc 781 acctgaaaga ggtatgctct cttaggaata cagtttctag cattaaacaa ataaacaagg 841 ggagaaaata aaactcaagg agtgaaaatc aggaggtgta ataaaatgtt cctcgcattc 901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //