LOCUS BC038978 921 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens calcyon neuron-specific vesicular protein, mRNA (cDNA clone MGC:47621 IMAGE:5734358), complete cds. ACCESSION BC038978 VERSION BC038978.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 921) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 921) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: i Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9257200. FEATURES Location/Qualifiers source 1..921 /db_xref="H-InvDB:HIT000052102" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47621 IMAGE:5734358" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..921 /gene="CALY" /gene_synonym="RP11-122K13.5" /db_xref="GeneID:50632" /db_xref="HGNC:HGNC:17938" /db_xref="MIM:604647" CDS 60..713 /gene="CALY" /gene_synonym="RP11-122K13.5" /codon_start=1 /product="calcyon neuron-specific vesicular protein" /protein_id="AAH38978.1" /db_xref="GeneID:50632" /db_xref="HGNC:HGNC:17938" /db_xref="MIM:604647" /translation="MVKLGCSFSGKPGKDPGDQDGAAMDSVPLISPLDISQLQPPLPD QVVIKTQTEYQLSSPDQQNFPDLEGQRLNCSHPEEGRRLPTARMIAFAMALLGCVLIM YKAIWYDQFTCPDGFLLRHKICTPLTLEMYYTEMDPERHRSILAAIGAYPLSRKHGTE TPAAWGDGYRAAKEERKGPTQAGAAAAATEPPGKPSAKAEKEAARKAAGSAAPPPAQ" BASE COUNT 198 a 320 c 279 g 124 t ORIGIN 1 cccgaccgcg tcctgcagca gctgccagtg gagccgcctg acaaggactg ccatccacca 61 tggtgaagct gggctgcagc ttctctggga agccaggtaa agaccctggg gaccaggatg 121 gggctgccat ggacagtgtg cctctgatca gccccttgga catcagccag ctccagccgc 181 cactccctga ccaggtggtc atcaagacac agacagaata ccagctgtcc tccccagacc 241 agcagaattt ccctgacctg gagggccaga ggctgaactg cagccaccca gaggaagggc 301 gcaggctgcc caccgcacgg atgatcgcct tcgccatggc gctactgggc tgcgtgctga 361 tcatgtacaa ggccatctgg tacgaccagt tcacctgccc cgacggcttc ctgctgcggc 421 acaagatctg cacgccgctg accctggaga tgtactacac ggagatggac cccgagcgcc 481 accgcagcat cctggcggcc atcggggcct acccgctgag ccgcaagcac ggcacggaga 541 cgccggcggc ctggggggac ggctaccgcg cagccaagga ggagcgcaag gggcccaccc 601 aggctggggc ggcggcggcg gccaccgaac cccccgggaa gccgtcggcc aaggcggaga 661 aggaggcggc gcggaaggcg gccgggagcg cggcgccccc gcccgcgcag tgacgtctcc 721 agccccgcag cccggcccgg gcgtcctccg ccagctcctg tgaccagcgc gtctcccgat 781 gctctccgcc gtgttcgtgt ccccaggcgc cctcgctgca gccccgcccc cgtgggtctc 841 tgactctgtc gcttttctct aagtaaagat ttcacgtcca aaaaaaaaaa aaaaaaaaaa 901 aaaaaaaaaa aaaaaaaaaa a //