LOCUS BC038108 3027 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens phosphatidic acid phosphatase type 2 domain containing
2, mRNA (cDNA clone MGC:33278 IMAGE:5268486), complete cds.
ACCESSION BC038108
VERSION BC038108.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3027)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3027)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC038108.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66773039.
FEATURES Location/Qualifiers
source 1..3027
/db_xref="H-InvDB:HIT000051993"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33278 IMAGE:5268486"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3027
/gene="PPAPDC2"
/gene_synonym="bA6J24.6"
/gene_synonym="FLJ46512"
/gene_synonym="FLJ90191"
/gene_synonym="MGC15483"
/db_xref="GeneID:403313"
/db_xref="HGNC:HGNC:23682"
CDS 82..969
/gene="PPAPDC2"
/gene_synonym="bA6J24.6"
/gene_synonym="FLJ46512"
/gene_synonym="FLJ90191"
/gene_synonym="MGC15483"
/codon_start=1
/product="phosphatidic acid phosphatase type 2 domain
containing 2"
/protein_id="AAH38108.2"
/db_xref="GeneID:403313"
/db_xref="HGNC:HGNC:23682"
/translation="MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLL
SSRATAVDPTCARLRASESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIA
LRSLLAIDLWLSKKLGVCAGESSSWGSVRPLMKLLEIWGHGIPWLLGTLYCLCRSDSW
AGREVLMNLLFALLLDLLLVALIKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRA
ALMSRFILNHLVLAIPLRVLVVLWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVD
YCWLSPHNAPVLFLLWSQR"
BASE COUNT 803 a 706 c 708 g 810 t
ORIGIN
1 agtcggaagc ggaagaggct gcagggccgg gaagcctctg tttggtccgg ccaggtcccg
61 ggatccgggc cgccagctgc gatgccaagt ccccggagga gcatggaggg acggccgctg
121 ggcgtctccg cttcgagcag cagcagcagc cccggcagcc cagcccatgg cggcggtggc
181 ggcggcagca ggtttgagtt ccagtccctg ctcagcagcc gcgccacggc cgtggacccc
241 acctgcgccc ggctccgtgc atcggagagc ccagttcacc gccgcggctc cttccccctg
301 gccgcggcgg gcccctcgca gtcgcccgcg cctccgctgc ccgaggagga ccgcatggac
361 ttgaacccgt ccttcctggg catcgccctg cgctccctgc tggccatcga cctgtggctg
421 tccaagaagc tgggggtgtg cgcgggagag agctcgtcgt ggggcagcgt gcgacccctt
481 atgaagctgc tggagatctg gggacacggc atcccctggc tgctgggcac cctctactgc
541 ctgtgcagga gcgacagctg ggccgggcgc gaggtgctga tgaacctgct cttcgccctg
601 ctgttggacc tgctgctggt ggccttgatc aaagggctgg tccgcaggcg ccgcccggcc
661 cacaaccaga tggacatgtt tgtcactctc tcggtggaca agtactcctt cccctcgggc
721 catgccacaa gggccgccct gatgtcgagg ttcatcctga accacctggt gctggccatt
781 ccactgaggg tgctggtggt tctgtgggcc ttcgtcttgg gcctatccag ggtcatgctg
841 gggcggcaca atgtcaccga cgtagctttt ggcttttttc tgggctacat gcagtacagc
901 atcgtggact attgctggct ctcaccccat aatgctccgg tcctcttttt actgtggagt
961 caacgatgac accatctcat tgattatggc accaggaagt ctgaaggttt ccacattcga
1021 tgatgtcaac ctaaaccagc agccatcccg cttgtccctc ttaggcattt caggcttcct
1081 ttgggatttc aggtgtccca tgatcttgat gtgctgctag gctggagcac acactggcca
1141 ttactgaaca cagccatatt agggaaagca aaaaaaccca aaaaaatcct ctattgtata
1201 tttattcaac aactgtttat gtttccagga caactgcaaa gaaaacaagc tgaggtggtt
1261 atactgttgc tgttaaaagt tggtatcagt aagatttgtg ttttgtgata atccctaaat
1321 caacatacca cttgtaaact gaacttcgag aaagaaacat gatgttcatt ctgtaaatat
1381 acatgcagac aggtcatgta ctaatcctag tccttttcct gaggtagatt ttaaacagta
1441 tttttaaagt ccaagacata ggtttttcta gtttattccc tgaagatctg ttgccacagt
1501 tgggagattt cttcttaatc ctgattttct tggtaagctt ttttacttta ttatctctat
1561 aatttattat ctctatccat atttgtggat cgggtagtgg gaaaagagat tataatactt
1621 gtctttctct cctctccctc catccctcaa aagatcttta tgcatttccc actactccct
1681 tactgtcttt tagcattcag agaaaaagcc aacttgctta aagaggaatc acttaaaagg
1741 taggcatatc taagatgctc atagaagagg aagaatggga catggcccca tgcttatttt
1801 tgtttacaac gtaacatggc atgagagagg gcagagaaac taagttgctg gggaaagtta
1861 gaggaactga aagtttggga ataggctgac cacatattat gccagtgacc agtatgacag
1921 gagatggggc cctgctgcca gtcatctcca ctgaataaag aataatgctc ctctttcagg
1981 gtaataaagt ggggaaaagg aacgtcttct caatgcaaga acataagctt tctcgtatat
2041 acctgtatgc tacagttttt cacatggaat tccgttttct gaggtacagc acattttagg
2101 taacagtatt taacttgaaa ttcatcatgg gagtctgctg ctataccagg cacaagataa
2161 aactccaaaa tttctgttta cattgacctt tacatttaaa gctgttcatc catggtgcct
2221 ccccaaatca taagaccaaa gaccaccaaa cgcagggtgg actctgctca ttattctttg
2281 acccagaaag actggagaag gtatgtgctt taagtgctgc tctacctgaa aagaaatcct
2341 ttaaattacc tatggaagtg atgtcctcag ataatcttaa tgactatttt ggcatttata
2401 aatagaaatg attatggact ttgatctgcc atacggaggt tcggaacctg gagaacggct
2461 gcgataagta ggttttgatt gagtgaaagc atgagcttgt tcagagtgag gggcatagtg
2521 aaaaaggaac agccatgcct caaaatcaaa tcatttgcat tcccacagca tcctgaatac
2581 cgactacctc ttcacttgct aaagcagcta aactgtgaag ctctaagtgg tttgggtttg
2641 ttgtttaacc ttagcgagat cctttaactg cagcaatatt caagccagat atttggaagc
2701 aaatgatatt tcctcttgca gtgtccacaa atctgaatat taggggcatg aaattaggct
2761 taccatctga tttgtaatta caattttgga attctctgtt ttagttgctg aggcctgagt
2821 tttctggctc ttaaagcata gatcatttca cctgatgttt ttgaagcatc ctaagtacag
2881 tagagtagaa aactgatttc tttgttaatt gtacactgaa taatgccttt taaaaatcaa
2941 aataaaatta acaaataatg gtgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa acaaaaaaaa aaaaaaa
//