LOCUS BC036831 4501 bp mRNA linear HUM 06-APR-2004 DEFINITION Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA clone IMAGE:5529276), partial cds. ACCESSION BC036831 VERSION BC036831.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4501) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4501) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 78 Row: o Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..4501 /db_xref="H-InvDB:HIT000094640" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5529276" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..4501 /gene="ARID5B" /gene_synonym="FLJ21150" /gene_synonym="MRF2" /db_xref="GeneID:84159" /db_xref="MIM:608538" CDS <1..2151 /gene="ARID5B" /gene_synonym="FLJ21150" /gene_synonym="MRF2" /codon_start=1 /product="ARID5B protein" /protein_id="AAH36831.1" /db_xref="GeneID:84159" /db_xref="MIM:608538" /translation="PRVRTLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEK DNETDQGSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSK QESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLPAMADYIANCTVKVDQ LGSDDIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLLYSRGNPGIMSPL AKKKLLSQVSGASLSSSYPYGSPPPLISKKKLIARDDLCSSLSQTHHGQSTDHMAVSR PSVIQHVQSFRSKPSEERKTINDIFKHEKLSRSDPHRCSFSKHHLNPLADSYVLKQEI QEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSLYRHTEHHLHNEQTSKYPSRDMYRE SENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAPTDDQPTDLSLPKNPHKPTGKVL GLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPMTMSGPKKYPESLSRSGKPHH VRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIAGKKARAVSPLDPSK EVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPGLYSGSLCNSGLNSRLP AGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHLAAATPVGSSY GDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL" BASE COUNT 1288 a 1097 c 995 g 1121 t ORIGIN 1 ccacgcgtcc ggactttaat aagccagaaa agcatccctg agcctctccc agcagcagac 61 atgaagaaaa aaatagaagg gtatcaggaa ttttcagcga agcccctggc atccagagta 121 gacccagaga aggacaacga aacagaccaa ggttccaaca gtgagaaggt ggcagaggag 181 gcgggagaga aggggcccac acctccactc ccaagtgctc ctctggcccc agaaaaagat 241 tcagccttgg tccctggggc cagcaaacag ccactcacct ctcctagtgc cctggtggac 301 tcaaaacaag aatccaaact gtgctgtttt acagagagcc ctgaaagtga accccaagaa 361 gcatccttcc ccagcttccc caccacacag ccaccgctgg caaaccagaa tgagacggag 421 gatgacaaac tgcccgccat ggcagattac attgccaact gcaccgtgaa ggtggaccag 481 ctgggcagtg acgacatcca caatgcgctc aagcagaccc caaaggtcct tgtggtccag 541 tcgtttgaca tgttcaaaga caaagacctg actgggccca tgaacgagaa ccatggactt 601 aattacacgc ccctgctcta ctctaggggc aacccaggca tcatgtcccc actggccaag 661 aaaaagcttt tgtcccaagt gagtggggcc agcctctcca gcagctaccc ttatggctcc 721 ccaccccctt tgatcagcaa aaagaaactg attgctaggg atgacttgtg ttccagtttg 781 tcccagaccc accatggcca aagcactgac catatggcgg tcagccggcc atcagtgatt 841 cagcacgtcc agagtttcag aagcaagccc tcggaagaga gaaagaccat caatgacatc 901 tttaagcatg agaaactgag tcgatcagat ccccaccgct gcagcttctc caagcatcac 961 cttaaccccc ttgctgactc ctacgtcctg aagcaagaaa ttcaggaggg caaggataaa 1021 ctcttagaga aaagggccct cccccattcc cacatgccta gcttcctggc tgacttctac 1081 tcgtcccctc atctccatag cctctacaga cacaccgagc accatcttca taatgaacag 1141 acatccaaat acccttccag ggacatgtac agggaatcgg aaaacagttc ttttccttcc 1201 cacagacacc aagaaaagct ccatgtaaat tatctcacgt ccctgcacct gcaagacaaa 1261 aagtcggcgg cagcagaagc ccctacggat gatcagccta cagatctgag ccttcccaag 1321 aacccgcaca aacctaccgg caaggtcctg ggcctggctc attccaccac agggccccag 1381 gagagcaaag gcatctccca gttccaggtc ttaggcagcc agagtcgaga ctgtcacccc 1441 aaagcctgtc gggtatcacc catgaccatg tcaggcccta aaaaataccc tgaatcgctt 1501 tcaagatcag gaaaacctca ccatgtgaga ctggagaatt tcaggaagat ggaaggcatg 1561 gtccacccaa tcctgcaccg gaaaatgagc ccgcagaaca ttggggcggc gcggccgatc 1621 aagcgcagcc tggaggattt ggaccttgtg attgcaggga aaaaggcccg ggcagtgtct 1681 cccttagacc catccaagga ggtctctggg aaggagaagg cctctgagca ggagagtgaa 1741 ggcagcaaag cagcgcacgg tgggcattcc gggggcggat cagaaggcca caagcttccc 1801 ctctcctccc ctatcttccc aggtctgtat tccgggagcc tgtgtaactc gggcctcaac 1861 tccaggctcc cggctgggta ttctcattct ctgcagtact tgaaaaacca gactgtgctt 1921 tctccactca tgcagcccct ggctttccac tcgcttgtga tgcaaagagg aatttttaca 1981 tcaccgacaa attctcagca gctgtacaga cacttggctg cggctacacc tgtaggaagt 2041 tcatatgggg accttttgca taacagcatt taccctttag ctgctataaa tcctcaagct 2101 gcctttccat cttcccagct gtcatccgtg caccccagta caaaactgta ggctcagctc 2161 tgcccagcag tccaaagcgg catggccaac agagcttcac tccttaccca ggagtgctgg 2221 cttatagagt tagaagtcag tatttcttct aatctgaggc tatgatcagt cccagctgta 2281 ggggcccaga ggggaggtga acatgcctga tttttgtggg acaactgtag cccacaaact 2341 gactggctgg tgagtcttga ctcccttcca acacagatgc ccaggcacct ccagatcatt 2401 cacttcgcac gtgggccttg tgaagggatt tgtgaatatc caggaagaac ttagaggacc 2461 ccatctgagt tcggatggtc aggaaacaat ctgggcaaaa aagaggcagg catttcaaag 2521 gaaggggcaa ggaagactgg caaacagatg gcaagggatg cccctctttt tcataaaact 2581 ctccaaggtt caatcaatgc aatgtatagt gaaacttcaa tagatctttc attttgacac 2641 tattaaacaa tccagagaag taaacactgt taaattgact gtatatattt gcttcttaaa 2701 actacctgta tcactgtttg ctcacctaat ttatatacag gtagttccat tttctcccag 2761 ttccttctcg tctttttttt tttttttttt tttattaaat ggtattgctt ttgtttgcag 2821 gtctttttgt ttttgttttg tttttgaggc tgactgactg tcctagttgt tgtgtgtttg 2881 taatttttcc acatcttatt ttgagcagct ttgggtggta aagttattgt ttacaaattg 2941 aagcaactga ttctagtgga acaaatgaaa aagaaacagt caagcacaca atagtgcaaa 3001 gaacgttcct ttgtagatcc gcaacttaag gattttgttc ctcataaatg gcatagttga 3061 aagagcttat acactgctta cccagccaaa tgctttgctt tgaagtattg ggttctgtga 3121 aaatattgag cattgtactt accttatcta ggctgtgaaa ctgtcctaca taccagagaa 3181 tcataaaaac aaaaacctca ctggcagcaa gctgccgaat aacaacagag tctagaggac 3241 atatttgtgg gctgcacaga tattttagga atttcagaaa ttagaacagg agccaaaatg 3301 atttacattg gcgttggcac tgattccttt aaatggtctg ggaaaggggg ttgggaagag 3361 gatggagctc aactggccag aagaggagca gctgcagtcc tgatagcttc tctagcctcg 3421 gtcttttgag tgataagtag tcatgttgtt ttcatccagt tggtttcttg tcattcccaa 3481 gaagaatctc ccaggccaca tctttgggga taactgacat actggattag ccttttcaaa 3541 agaaaagtca tcctatttgg ttttatgggg tgtgagtttt gtgtgtacac acacagaaac 3601 atgtaaggtg gtttgggtca tgtttttaac cacctggcaa tacagtccac tttctggttt 3661 cttttattgt gggaagtaaa tggtcaagct gctcaggcag tgaaaagatg tggagaatgt 3721 ccgttgtcat tcttgccact gtattccatt tgctaccgag atataacatt aaggtggaca 3781 cattttctaa ctgtattaat taaaagtcaa tggatacaga gagtggattt tctccccaag 3841 tcccatccct gctgaagacc gcttggatga actccccaac ccactgtgcc cctcccgcaa 3901 cactaccagt agactttaga accatagtta actaagtctt ttacctctga gatacttaat 3961 tctgggaaaa ttggtgacaa ttttcaactt ctaaataggt aactcgactg caaaataatc 4021 aaaactgata acaatgaaac tgcggctctt aaacaaagcc atgcatgccg tgcatttgta 4081 ttgaaatgtc tccatgatat gaagccaaat attcaatgta acatacttaa tatccaaagg 4141 tggaaacaaa agaatgtaga gatccagtgt taagagttcc atttgcttca attaattatt 4201 taccttcctg tggaataata tatatatata tatttaatag aaccatagat agactagtag 4261 aatttagatt ataaatgtgt gagtgcagat tatcctgcta ttgcacaagc tagagggggg 4321 aaaaatctca attccagcta gcaagatgct agccaggaca catataagaa agttgcacta 4381 gattgaatgg tcacagaatc ggaggacatg gaagaaaaag gaaacttcgg tggttctgca 4441 gcagacatgg gctaggtcat atgtggtttc tatgagttcg tgtctcaaaa aaaaaaaaaa 4501 a //