LOCUS BC036457 3032 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone
MGC:33461 IMAGE:4797574), complete cds.
ACCESSION BC036457
VERSION BC036457.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3032)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3032)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036457.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059800.
FEATURES Location/Qualifiers
source 1..3032
/db_xref="H-InvDB:HIT000051708"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33461 IMAGE:4797574"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3032
/gene="PNKD"
/gene_synonym="BRP17"
/gene_synonym="DKFZp564N1362"
/gene_synonym="DYT8"
/gene_synonym="FKSG19"
/gene_synonym="FPD1"
/gene_synonym="KIPP1184"
/gene_synonym="MR-1"
/gene_synonym="MR1"
/gene_synonym="PDC"
/gene_synonym="TAHCCP2"
/db_xref="GeneID:25953"
/db_xref="HGNC:HGNC:9153"
/db_xref="MIM:609023"
CDS 47..1204
/gene="PNKD"
/gene_synonym="BRP17"
/gene_synonym="DKFZp564N1362"
/gene_synonym="DYT8"
/gene_synonym="FKSG19"
/gene_synonym="FPD1"
/gene_synonym="KIPP1184"
/gene_synonym="MR-1"
/gene_synonym="MR1"
/gene_synonym="PDC"
/gene_synonym="TAHCCP2"
/codon_start=1
/product="paroxysmal nonkinesigenic dyskinesia"
/protein_id="AAH36457.1"
/db_xref="GeneID:25953"
/db_xref="HGNC:HGNC:9153"
/db_xref="MIM:609023"
/translation="MAAVVAATALKSRGARNARVLRGILAGATANKVSHNRTRALQSH
SSSEGKEEPEPLSPELEYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARN
RYPKGHSKTQPRLFNGVKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEK
EGVTLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGR
LQIRALATPGHTQGHLVYLLDGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLD
TVLGLGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLG
EERSYNPFLRTHCLALQEALGPGPGPTGDDDYSRAQLLEELRRLKDMHKSK"
BASE COUNT 602 a 977 c 807 g 646 t
ORIGIN
1 actattcccg gcggggagcg cggtgaagcg ggggtgggat ctgaacatgg cggcggtggt
61 agctgctacg gcgctgaaga gccggggggc gagaaatgcc cgcgtcctcc gggggattct
121 cgcaggagcc acagctaaca aggtttctca taacaggacc cgggccctgc aaagccacag
181 ctcctcagag ggcaaggagg aacctgaacc cctatccccg gagctggaat acattcccag
241 aaagaggggc aagaacccca tgaaagctgt gggactggcc tggtacagcc tgtacacccg
301 cacctggctc gggtacctct tctaccgaca gcagctgcgc agggctcgga atcgctaccc
361 taaaggccac tcgaaaaccc agccccgcct cttcaatgga gtgaaggtgc ttcccatccc
421 tgtcctctcg gacaactaca gctacctcat catcgacacc caggcccagc tggctgtggc
481 tgtggaccct tcagaccctc gggctgtgca ggcttccatt gaaaaggaag gggtcacctt
541 ggtcgccatt ctgtgtactc acaagcactg ggaccacagt ggagggaacc gtgacctcag
601 ccggcggcac cgggactgtc gggtgtacgg gagccctcag gacggcatcc cctacctcac
661 ccatcccctg tgtcatcaag atgtggtcag cgtgggacgg cttcagatcc gggccctggc
721 tacacctggc cacacacaag gccatctggt ctacctactg gatggggagc cctacaaggg
781 tccctcctgc ctcttctcag gggacctgct cttcctctct ggctgtgggc ggacctttga
841 gggcaatgca gagaccatgc tgagctcact ggacactgtg ctggggctag gggatgacac
901 ccttctgtgg cctggtcatg agtatgcaga ggagaacctg ggctttgcag gtgtggtgga
961 gcccgagaac ctggcccggg agaggaagat gcagtgggtg cagcggcagc ggctggagcg
1021 caagggcacg tgcccatcta ccctgggaga ggagcgctcc tacaacccgt tcctgagaac
1081 ccactgcctg gcgctacagg aggctctggg gccggggccg ggccccactg gggatgatga
1141 ctactcccgg gcccagctcc tggaagagct ccgccggctg aaggatatgc acaagagcaa
1201 gtgatgcccc cagcgccccc agcccagccc actccccgca tggggaggcc gccaccacca
1261 acacctcatc atccttctca tcgctaacac caccacctcc atcggcaccc aagcgggcat
1321 catcccccca cactgctcag gggaggggag ggatcaggcg atgagactgt gaggccaaaa
1381 gaagcgggcc tgttggaggc tgggaacccc gcagcgcgag gctgcctcat caacggcaag
1441 aggaaaggag gggtctcggg acatctccag accctaccaa ctgggagggt cccctcctcc
1501 ttccctactc ctgggacggc agcaaggaca tgggggctgc tgttagcttc tccgtcagga
1561 ggcctcactc actgtagccc tggaacccag ggtccatctt gcccttcccc catccatggt
1621 tgggaaagaa gctcagcccc tcacagtggc ctcaagtgtg atgccttaca aaagcaccac
1681 tcagatgggc agctggactc tggtgtcctg agactctgcc ctcttcccac agcctccctg
1741 ccccacccat ccctgcaaag ccatttttca gacagagcca ttcctaagaa cactgaaggg
1801 ctggaatgct ggctggccac tctctgcctc agtggcctcc ctacagcctg gaagaaggag
1861 ggtcctgatt gccaaggaaa cctctcctca ttgggctaag gagacactgg agtctggagt
1921 gtggagcccc acagtcttgc aggtcacatg ctctccttgc acatctggcc tggttgtacc
1981 cactggcctc tgcctctgcc ctgggccaaa agggcccctc cttgccaggg gagagacagc
2041 cacggtcctc tttggccgat gctgtattct cattttggcc cttgttctta ggcccgtctg
2101 cccgccttcc tccatctaac ctttcctgtt ttatccgcag cccttttctt ctttgagtta
2161 gtaaagattt attctgtaac ctgacactca tctggccctt tgcagtttgc cagccatatt
2221 cccatgtgat ttcccactgg atccaggccc ccatccggct ggcaggaggg ggctctgacg
2281 tgcaggttgg aaatcagaag tctgtgagag cgcgggagtg catggcagct ctgggtccca
2341 gacctggccc gacccctctg cttcacctcc agctctgctg ctcctctact cttgggttga
2401 gatccctttg gagccacagc gaggaaccct gtggtcctca ggcaggtgta ccttgagtca
2461 gccaggagcc ctcttttcct gtgtcaaagc ctgccctcgg gctctgctca cctctggtga
2521 ccctccaaga tgcccctgcc ctcagtttcc cctcatgatc tggcctctgc ccccttctct
2581 agccacagcc tctagtacac tttagcaata ccaccagact agttagagtt ccgcactcac
2641 caagcaagac atacagtttc atgcctctgt gccttcgctc atgctgtttc ttccgactgg
2701 aatgccttcc cctgctcctc ctgccttgtc tgcctggcaa gttcatctct cacgatcccc
2761 tcaaaggccc cctcctccag gaaggcaacc cctgtgcccc tcccctccag gctacctctg
2821 cactttgtca atgcttctct tgtggcactt atcacgctgt attttacttg tttacatgtt
2881 tgtctcccct tctagactgt gaatccttaa gggcatggac tgtatcttat gcatctctgt
2941 atttctgcgc ctagcacggt gcctagcaca cagtaggcgc tcaataaatg ttgaatgaat
3001 gaatgattta atcaagaaaa aaaaaaaaaa aa
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