LOCUS BC036451 2000 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cathepsin F, mRNA (cDNA clone MGC:33063
IMAGE:4830274), complete cds.
ACCESSION BC036451
VERSION BC036451.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2000)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2000)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6042195.
FEATURES Location/Qualifiers
source 1..2000
/db_xref="H-InvDB:HIT000051703"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33063 IMAGE:4830274"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2000
/gene="CTSF"
/gene_synonym="CATSF"
/db_xref="GeneID:8722"
/db_xref="HGNC:HGNC:2531"
/db_xref="MIM:603539"
CDS 66..1520
/gene="CTSF"
/gene_synonym="CATSF"
/codon_start=1
/product="cathepsin F"
/protein_id="AAH36451.1"
/db_xref="GeneID:8722"
/db_xref="HGNC:HGNC:2531"
/db_xref="MIM:603539"
/translation="MAPWLQLLSLLGLLPGAVAAPAQPRAASFQAWGPPSPELLAPTR
FALEMFNRGRAAGTRAVLGLVRGRVRRAGQGSLYSLEATLEEPPCNDPMVCRLPVSKK
TLLCSFQVLDELGRHVLLRKDCGPVDTKVPGAGEPKSAFTQGSAMISSLSQNHPDNRN
ETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRA
QKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWD
WRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACM
GGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAA
WLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIK
NSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD"
BASE COUNT 405 a 583 c 599 g 413 t
ORIGIN
1 agcgtgggta cccggtgggt cggtggagcg tctgttgggt ccgggccgcc ggcttcgccc
61 tcgccatggc gccctggctg cagctcctgt cgctgctggg gctgctcccg ggcgcagtgg
121 ccgcccccgc ccagccccga gccgccagct ttcaggcctg ggggccgccg tccccggagc
181 tgctggcgcc cacccgcttc gcgctggaga tgttcaaccg cggccgggct gcggggacgc
241 gggccgtgct gggccttgtg cgcggccgcg tccgccgggc gggccagggg tcgctgtact
301 ccctggaggc caccctggag gagccaccct gcaacgaccc catggtgtgc cggctccccg
361 tgtccaagaa aaccctgctc tgcagcttcc aagtcctgga tgagctcgga agacacgtgc
421 tgctgcggaa ggactgtggc ccagtggaca ccaaggttcc aggtgctggg gagcccaagt
481 cagccttcac tcagggctca gccatgattt cttctctgtc ccaaaaccat ccagacaaca
541 gaaacgagac tttcagctca gtcatttccc tgttgaatga ggatcccctg tcccaggact
601 tgcctgtgaa gatggcttca atcttcaaga actttgtcat tacctataac cggacatatg
661 agtcaaagga agaagcccgg tggcgcctgt ccgtctttgt caataacatg gtgcgagcac
721 agaagatcca ggccctggac cgtggcacag ctcagtatgg agtcaccaag ttcagtgatc
781 tcacagagga ggagttccgc actatctacc tgaatactct cctgagaaaa gagcctggca
841 acaagatgaa gcaagccaag tctgtgggtg acctcgcccc acctgaatgg gactggagga
901 gtaagggggc tgtcacaaaa gtcaaagacc agggcatgtg tggctcctgc tgggccttct
961 cagtcacagg caatgtggag ggccagtggt ttctcaacca ggggaccctg ctctccctct
1021 ctgaacagga gctcttggac tgtgacaaga tggacaaggc ctgcatgggc ggcttgccct
1081 ccaatgccta ctcggccata aagaatttgg gagggctgga gacagaggat gactacagct
1141 accagggtca catgcagtcc tgcaacttct cagcagagaa ggccaaggtc tacatcaatg
1201 actccgtgga gctgagccag aacgagcaga agctggcagc ctggctggcc aagagaggcc
1261 caatctccgt ggccatcaat gcctttggca tgcagtttta ccgccacggg atctcccgcc
1321 ctctccggcc cctctgcagc ccttggctca ttgaccatgc ggtgttgctt gtgggctacg
1381 gcaaccgctc tgacgttccc ttttgggcca tcaagaacag ctggggcact gactggggtg
1441 agaagggtta ctactacttg catcgcgggt ccggggcctg tggcgtgaac accatggcca
1501 gctcggcggt ggtggactga agaggggccc ccagctcggg acctggtgct gatcagagtg
1561 gctgctgccc cagcctgaca tgtgtccagg cccctccccg ggaggtacag ctggcagagg
1621 gaaaggcact gggtacctca gggtgagcag agggcactgg gctggggcac agcccctgct
1681 tccctgcacc ccattcccac cctgaagttc tgcacctgca cctttgttga attgtggtag
1741 cttaggagga tgtcagggtg aagggtggta tcttggcagt tgaagctggg gcaagaactc
1801 tgggcttggg taatgagcag gaagaaaatt ttctgatctt aagcccagct ctgttctgcc
1861 cccgctttcc tctgtttgat actataaatt ttctggttcc cttggattta gggatagtgt
1921 ccccctccat gtccaggaaa cttgtaacca cccttttcta acagcaataa agaggtgtcc
1981 ttgtaaaaaa aaaaaaaaaa
//