LOCUS BC036380 4955 bp mRNA linear HUM 06-SEP-2007
DEFINITION Homo sapiens ninein-like, mRNA (cDNA clone MGC:33226
IMAGE:5268454), complete cds.
ACCESSION BC036380
VERSION BC036380.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4955)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4955)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036380.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749677.
FEATURES Location/Qualifiers
source 1..4955
/db_xref="H-InvDB:HIT000051689"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33226 IMAGE:5268454"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4955
/gene="NLP"
/gene_synonym="dJ691N24.1"
/db_xref="GeneID:22981"
/db_xref="MIM:609580"
CDS 27..4169
/gene="NLP"
/gene_synonym="dJ691N24.1"
/codon_start=1
/product="ninein-like"
/protein_id="AAH36380.1"
/db_xref="GeneID:22981"
/db_xref="MIM:609580"
/translation="MDEEENHYVSQLREVYSSCDTTGTGFLDRQELTQLCLKLHLEQQ
LPVLLQTLLGNDHFARVNFEEFKEGFVAVLSSNAGVRPSDEDSSSLESAASSAIPPKY
VNGSKWYGRRSRPELCDAATEARRVPEQQTQASLKSHLWRSASLESVESPKSDEEAES
TKEAQNELFEAQGQLQTWDSEDFGSPQKSCSPSFDTPESQIRGVWEELGVGSSGHLSE
QELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLFSHEPALLLESSTR
VKPSKAWSHYQVPEESGCHTTTTSSLVSLCSSLRLFSSIDDGSGFAFPDQVLAMWTQE
GIQNGREILQSLDFSVDEKVNLLELTWALDNELMTVDSAVQQAALACYHQELSYQQGQ
VEQLARERDKARQDLERAEKRNLEFVKEMDDCHSTLEQLTEKKIKHLEQGYRERLSLL
RSEVEAERELFWEQAHRQRAALEWDVGRLQAEEAGLREKLTLALKENSRLQKEIVEVV
EKLSDSERLALKLQKDLEFVLKDKLEPQSAELLAQEERFAAVLKEYELKCRDLQDRND
ELQAELEGLWARLPKNRHSPSWSPDGRRRQLPGLGPAGISFLGNSAPVSIETELMMEQ
VKEHYQDLRTQLETKVNYYEREIAALKRNFEKERKDMEQARRREVSVLEGQKADLEEL
HEKSQEVIWGLQEQLQDTARGPEPEQMGLAPCCTQALCGLALRHHSHLQQIRREAEAE
LSGELSGLGALPARRDLTLELEEPPQGPLPRGSQRSEQLELERALKLQPCASEKRAQM
CVSLALEEEELELARGKRVDGPSLEAEMQALPKDGLVAGSGQEGTRGLLPLRPGCGER
PLAWLAPGDGRESEEAAGAGPRRRQAQDTEATQSPAPAPAPASHGPSERWSRMQPCGV
DGDIVPKEPEPFGASAAGLEQPGARELPLLGTERDASQTQPRMPPLRPAASCGGQAER
LQAIQEERARSWSRGTQEQASEQQARAEGALEPGCHKHSVEVARRGSLPSHLQLADPQ
GSWQEQLAAPEEGETKIALEREKDDMETKLLHLEDVVRALEKHVDLRENDRLEFHRLS
EENTLLKNDLGRVRQELEAAESTHDAQRKEIEVLKKDKEKACSEMEVLNRQNQNYKDQ
LSQLNVRVLQLGQEASTHQAQNEEHRVTIQMLTQSLEEVVRSGQQQSDQIQKLRVELE
CLNQEHQSLQLPWSELTQTLEESQDQVQGAHLRLRQAQAQHLQEVRLVPQDRVAELHR
LLSLQGEQARRRLDAQREEHEKQLKATEERVEEAEMILKNMEMLLQEKVDKLKEQFEK
NTKSDLLLKELYVENAHLVRALQATEEKQRGAEKQSRLLEEKVHALNKLVSRIAPAAL
SV"
BASE COUNT 1243 a 1246 c 1582 g 884 t
ORIGIN
1 ggaggcgcct cccagcctgc tatgggatgg atgaagaaga gaaccactat gtctcgcagc
61 tcagggaagt ctacagcagc tgcgacacca cggggactgg ctttctggac cgccaggagc
121 tgacccagct ctgccttaag cttcacctgg agcagcagct gcccgtcctc ctgcagacgc
181 ttctcggaaa cgaccatttc gccagggtta actttgagga atttaaggaa ggttttgtgg
241 ctgtgttgtc ttcaaatgct ggtgttcgcc cctcagatga agacagtagt tctttggaat
301 cagctgcctc cagtgccatc cctccaaagt atgtgaatgg ttctaagtgg tatggccgtc
361 ggagccggcc tgagctatgt gacgctgcca cagaagccag acgcgtgccg gagcagcaaa
421 cccaggccag cctgaaaagt cacctctggc gctcagcgtc tctggagagc gtggagagtc
481 ccaagtcaga tgaagaggcc gagagcacta aagaagctca gaatgaatta tttgaagcac
541 aaggacagct gcagacctgg gattctgagg actttgggag cccccagaag tcctgcagcc
601 cctcctttga caccccagag agccagatcc ggggcgtgtg ggaggagctg ggggtgggca
661 gcagcggaca cctgagcgag caggagctgg ctgtggtctg ccagagcgtc gggctccagg
721 gactcgagaa agaggaactc gaagacctgt ttaacaaact ggatcaagac ggagacggca
781 aagtgagtct tgaggaattc cagcttggcc tcttcagtca tgagcccgcg ctacttctag
841 agtcttccac tcgggttaaa ccgagcaagg cttggtctca ttaccaggtc ccagaggaga
901 gcggctgcca caccaccaca acctcatccc tcgtgtccct gtgctccagc ctgcgcctct
961 tctccagcat tgacgatggt tctggcttcg cttttcctga tcaggtcctg gccatgtgga
1021 cccaggaggg gattcagaat ggcagggaga tcttgcagag cctggacttc agcgtggacg
1081 agaaggtgaa ccttctggag ctgacctggg cccttgacaa cgagctcatg acagtggaca
1141 gtgccgtcca gcaggcagcc ctggcctgct accaccagga gctgagctac cagcaagggc
1201 aggtggagca gctggcaagg gagcgtgaca aggcaaggca ggacctggag agggccgaga
1261 agaggaacct ggagtttgtg aaagagatgg acgactgcca ctccaccctg gagcagctca
1321 cggagaagaa aatcaagcat ctggagcagg ggtaccggga aaggctgagc ctcctgcggt
1381 ctgaggtgga ggcggagcga gagctgttct gggagcaggc ccacaggcag agggccgcgc
1441 tggagtggga cgtggggcgc ctgcaggctg aggaggctgg cctccgcgag aagctgaccc
1501 tggccctgaa ggaaaacagt cgcctacaga aggagattgt ggaagtggtg gaaaagcttt
1561 cggattcgga gaggctggcc ctgaagctgc agaaggacct ggagtttgtg ctgaaggaca
1621 agctggagcc acagagtgca gagctcctgg cccaggagga gcggttcgca gcagtcctga
1681 aggaatacga gctcaagtgc cgggacctgc aggaccgcaa cgatgagctg caagctgagc
1741 tggaaggcct gtgggcgcgg ctgcccaaga accggcacag cccctcatgg agcccggatg
1801 ggcgcagacg gcagctccct ggactcggcc cagcaggcat ttcattcctg ggtaattctg
1861 ctccagtgag tatagaaacg gagctgatga tggagcaggt aaaggagcat taccaagacc
1921 tcaggaccca gctggagacc aaggtaaatt actacgaaag ggaaattgcg gcactgaaaa
1981 ggaactttga gaaggagagg aaggacatgg agcaggctcg ccggcgcgag gtcagcgtgc
2041 tggagggtca gaaggccgac ctggaggagc tccacgagaa gtctcaggag gtcatctggg
2101 gcctgcagga gcagctgcag gacacagccc gcggccccga gcctgagcag atgggcctgg
2161 caccctgctg cacccaggca ctgtgtggcc tggccctgcg gcatcacagc cacctgcagc
2221 agatcaggag agaggctgag gcggagctga gtggagagct gtcggggctg ggagccctgc
2281 ccgctcgcag agacctgacc ttggagctgg aggagccgcc gcagggaccc ctgccacgcg
2341 ggagccagag gtcggagcag ctggagctgg agagggcact gaagctgcag ccctgtgcga
2401 gcgagaagcg cgcccagatg tgcgtatcgt tggccctcga ggaggaggag ttggagcttg
2461 cccgcgggaa gcgagtggac gggccctccc tggaagcaga gatgcaggcc ctgccgaaag
2521 atgggctggt ggcaggaagt ggccaggagg gcacacgtgg cctcctacca ctgcgtccgg
2581 gctgtgggga gcggccactg gcctggctgg ccccaggtga tggcagagag tctgaggagg
2641 cggcaggagc cgggcctcgc cgcaggcaag cccaggacac agaagctacg cagagcccgg
2701 cccccgcccc tgccccggca tcccacggcc cctcagagag gtggtcacgc atgcagccct
2761 gtggagtgga tggggatatt gtcccaaagg agccagagcc tttcggcgcg agcgcagcgg
2821 ggctggagca gcctggagcc cgggagctgc ctctgctggg aacagagaga gacgcctcgc
2881 aaacccagcc acggatgcca cccctgaggc cggccgcttc gtgcggggga caggctgaga
2941 ggctacaggc cattcaggaa gagcgagcac gaagctggag caggggcacc caggagcagg
3001 cctcggagca gcaggcccgg gccgagggcg ccctggagcc tgggtgtcac aagcacagcg
3061 tggaggttgc caggagaggg tccttgccat cccacctcca gctcgcagac ccgcagggtt
3121 cctggcagga gcagcttgct gccccagaag agggggagac caaaatagcg ctggagagag
3181 agaaggatga catggaaacc aaacttctac atctggaaga cgtcgtccgg gctctggaga
3241 aacatgtaga tttgagagag aacgacagac tggagttcca tagactttct gaagaaaaca
3301 ctttgttgaa aaacgatctg ggaagggttc ggcaagagct tgaagctgca gaaagtactc
3361 acgatgcaca gaggaaggaa attgaggttt taaagaaaga caaggaaaag gcctgctctg
3421 agatggaggt gctcaacaga cagaatcaga actacaagga tcaattatcc cagctcaatg
3481 tcagggttct tcaactggga caggaggctt ctacccacca ggcccaaaac gaggagcatc
3541 gtgtgaccat tcagatgtta acacagagcc tggaggaggt ggttcgcagt gggcagcagc
3601 agagtgacca aatccaaaaa cttagagttg aacttgaatg cctgaatcag gaacatcaga
3661 gcctgcagct gccatggtca gagctgaccc agacccttga ggaaagtcaa gaccaggtgc
3721 agggagctca cctgaggctg aggcaggccc aggcccagca cttgcaggag gtccggctgg
3781 tgccccagga ccgtgtggcc gagctgcatc gcctgctcag ccttcaggga gagcaggcca
3841 ggaggcgcct ggatgcacag cgggaagaac atgagaaaca gctgaaagcc acagaagagc
3901 gggtggaaga ggcggagatg attctgaaga atatggaaat gctcctccaa gagaaagtgg
3961 ataagctgaa ggagcagttt gaaaagaaca cgaagtccga cctgctgctg aaggagctgt
4021 acgtggagaa cgcccacctg gtgagagcac ttcaggccac cgaggagaag cagcgaggcg
4081 ccgagaaaca aagccgcctc ttggaagaaa aagttcacgc tctcaacaaa ctcgtcagta
4141 ggattgcccc cgcagccctc tctgtgtaaa gacagattat tttctaggat tcattcgaaa
4201 gcacatcttt taaattaagc cactgtgctg ccttagattc cgtgggtcat gagccatgag
4261 tcctgggaca tctgaggatt gggattcttt gttcaccccg cagatagtta atgaatggtc
4321 tgccctgggc aagatggagg tgggggctgg gggaatatgc atgttgcaga agccggcgtt
4381 tttattagcg gtcctgagta atttcccttg gcaaaattcc cagttttgcc actcgctgga
4441 gccagatcct gggagctgtc agcaaggagc aggtaagtga gcagttatgg acagcacttt
4501 ccatgtggtg cttccgaccc tggctgtcag agtgaaatgt aaagtcaggg ctctgtacag
4561 ttttgccatt tcactgttct gctttaagct tagcttatta gaactcttgg tggagggtgc
4621 gtacacacat tccagaaaag gcttcactcg ctgggaacgt caacccagcg agaaaggagg
4681 ggaagcccct tctccgggga ccttatctgt ggactcaggg atgatggtgt ttattgcaaa
4741 tgcacaatct ttttcccatt gaaatgtcat cacactggaa attgtactat atgtaaaaaa
4801 aaaaaaaaag tatagtttta tatttgaaat gtatgcaaat tatggccata tggctgattg
4861 gaatgtacta ctgtaatata aaaagtcact gtatttgcaa taaattcttt tctattaaaa
4921 ttgaaaaaaa aaaaaaaaag aaaaaaaaaa aaaaa
//