LOCUS BC036093 4030 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens hepatic leukemia factor, mRNA (cDNA clone MGC:33822
IMAGE:5288156), complete cds.
ACCESSION BC036093
VERSION BC036093.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542934.
FEATURES Location/Qualifiers
source 1..4030
/db_xref="H-InvDB:HIT000051622"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33822 IMAGE:5288156"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4030
/gene="HLF"
/gene_synonym="MGC33822"
/db_xref="GeneID:3131"
/db_xref="HGNC:HGNC:4977"
/db_xref="MIM:142385"
CDS 480..1367
/gene="HLF"
/gene_synonym="MGC33822"
/codon_start=1
/product="hepatic leukemia factor"
/protein_id="AAH36093.1"
/db_xref="GeneID:3131"
/db_xref="HGNC:HGNC:4977"
/db_xref="MIM:142385"
/translation="MEKMSRPLPLNPTFIPPPYGVLRSLLENPLKLPLHHEDAFSKDK
DKEKKLDDESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIPPSPS
QHDHSPHPPGLQPASSAAPSVMDLSSRASAPLHPGIPSPNCMQSPIRPGQLLPANRNT
PSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARKVF
IPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRK
ELGKCKNILAKYEARHGPL"
BASE COUNT 1092 a 862 c 877 g 1199 t
ORIGIN
1 ggtggggggc cgcggagcgc tggggagcag cggccgccgg cgcggggagg ggggtggggt
61 gggacggcgc accgcctccg gtgctggcac taggggctgg ggtcggcgcg gtgtcttctg
121 cccttctgca gccgtcgaca tttttttttc tttctttttt tcaattttga acattttgca
181 aaacgagggg ttcgaggcag gtgagagcat cctgcacgtc gccggggagc ccgcgggcac
241 ttggcgcgct ctcctgggac cgtctgcact ggaaacccga aagttttttt ttaatatata
301 tttttatgca gatgtattta taaagatata agtaattttt ttcttccctt ttctccaccg
361 ccttgagagc gagtactttt ggcaaaggac ggaggaaaag ctcagcaaca ttttaggggg
421 cggttgtttc tttctttctt atttcttttt ttaaggggaa aaaatttgag tgcatcgcga
481 tggagaaaat gtcccgaccg ctccccctga atcccacctt tatcccgcct ccctacggcg
541 tgctcaggtc cctgctggag aacccgctga agctccccct tcaccacgaa gacgcattta
601 gtaaagataa agacaaggaa aagaagctgg atgatgagag taacagcccg acggtccccc
661 agtcggcatt cctggggcct accttatggg acaaaaccct tccctatgac ggagatactt
721 tccagttgga atacatggac ctggaggagt ttttgtcaga aaatggcatt ccccccagcc
781 catctcagca tgaccacagc cctcaccctc ctgggctgca gccagcttcc tcggctgccc
841 cctcggtcat ggacctcagc agccgggcct ctgcacccct tcaccctggc atcccatctc
901 cgaactgtat gcagagcccc atcagaccag gtcagctgtt gccagcaaac cgcaatacac
961 caagtcccat tgatcctgac accatccagg tcccagtggg ttatgagcca gacccagcag
1021 atcttgccct ttccagcatc cctggccagg aaatgtttga ccctcgcaaa cgcaagttct
1081 ctgaggaaga actgaagcca cagcccatga tcaagaaagc tcgcaaagtc ttcatccctg
1141 atgacctgaa ggatgacaag tactgggcaa ggcgcagaaa gaacaacatg gcagccaagc
1201 gctcccgcga cgcccggagg ctgaaagaga accagatcgc catccgggcc tcgttcctgg
1261 agaaggagaa ctcggccctc cgccaggagg tggctgactt gaggaaggag ctgggcaaat
1321 gcaagaacat acttgccaag tatgaggcca ggcacgggcc cctgtaggat ggcatttttg
1381 caggctggct ttggaataga tggacagttt gtttcctgtc tgatagcacc acacgcaaac
1441 caacctttct gacatcagca ctttaccaga ggcataaaca caactgactc ccattttggt
1501 gtgcatctgt gtgtgtgtgc gtgtatatgt gcttgtgctc atgtgtgtgg tcagcggtat
1561 gtgcgtgtgc gtgttccttt gctctggcca ttttaaggta gccctctcat cgtcttttag
1621 ttccaacaaa gaaaggtgcc atgtctttac tagactgagg agccctctcg cgggtctccc
1681 atcccctccc tccttcactc ctgcctcctc agctttgctt catgttcgag cttacctact
1741 cttccaggac tctctgcttg gattcactaa aaagggccct ggtaaaatag tggatctcag
1801 tttttaagag tacaagctct tgtttctgtt tagtccgtaa gttaccatgc taatgaggtg
1861 cacacaataa cttagcacta atccgcagct ctagtccttt ataagttgct ttcctcttac
1921 tttcagtttt ggtgataatc gtcttcaaat taaagtgctg tttagattta ttagatccca
1981 tatttactta ctgctatcta ctaagtttcc ttttaattct accaacccca gataagtaag
2041 agtactatta atagaacaca gagtgtgttt ttgcactgtc tgtacctaaa gcaataatcc
2101 tattgtacgc tagagcatgc tgcctgagta ttactagtgg acgtaggata ttttccctac
2161 ctaagaattt cactgtcttt taaaaaacaa aaagtaaagt aatgcatttg agcatggcca
2221 gactattccc taggacaagg aagcagaggg aaatgggagg tctaaggatg aggggttaat
2281 ttatcagtac atgagccaaa aactgcgtct tggattagcc tttgacattg atgtgttcgg
2341 ttttgttgtt ccccttccct cacaccctgc ctcgccccca cttttctagt taactttttc
2401 catatccctc ttgacattca aaacagttac ttaagattca gttttcccac tttttggtaa
2461 tatatatatt tttgtgaatt atactttgtt gtttttaaaa agaaaatcag ttgattaagt
2521 taataagttg atgttttcta aggccctttt tcctagtggt gtcatttttg aatgcctcat
2581 aaattaatga ttctgaagct tatgtttctt attctctgtt tgcttttgaa cgtatgtgct
2641 cttataaagt ggacttctga aaaatgaatg taaaagacac tggtgtatct cagaagggga
2701 tggtgttgtc acaaactgtg gttaatccaa tcaatttaaa tgtttactat agaccaaaag
2761 gagagattat taaatcgttt aatgtttata cagagtaatt ataggaagtt cttttttgta
2821 cagtattttt cagatataaa tactgacaat gtattttgga agacatatat tatatataga
2881 aaagaggaga ggaaaactat tccatgtttt aaaattatat agcaaagata tatattcacc
2941 aatgttgtac agagaagaag tgcttggggg tttttgaagt ctttaatatt ttaagcccta
3001 tcactgacac atcagcatgt tttctgcttt aaattaaaat tttatgacag tatcgaggct
3061 tgtgatgacg aatcctgctc taaaatacac aaggagcttt cttgtttctt attaggcctc
3121 agaaagaagt cagttaacgt cacccaaaag cacaaaatgg attttagtca aatatttatt
3181 ggatgataca gtgtttttta ggaaaagcat ctgccacaaa aatgttcact tcgaaattct
3241 gagttcctgg aatggcacgt tgctgccagt gccccagaca gttcttttct accctgcggg
3301 cccgcacgtt ttatgaggtt gatatcggtg ctatgtgttt ggtttataat ttgatagatg
3361 tttgacttta aagatgattg ttcttttgtt tcattaagtt gtaaaatgtc aagaaattct
3421 gctgttacga caaagaaaca ttttatgcta gattaaaata tcctttcatc aatgggattt
3481 tctagtttcc tgccttcaga gtatctaatc ctttaatgat ctggtggtct cctcgtcaat
3541 ccatcagcaa tgcttctctc atagtgtcat agacttggga aacccaacca gtaggatatt
3601 tctacaaggt gttcattttg tcacaagctg tagataacag caagagatgg gggtgtattg
3661 gaattgcaat acattgttca ggtgaataat aaaatcaaaa acttttgcaa tcttaagcag
3721 agataaataa aagatagcaa tatgagacac aggtggacgt agagttggcc tttttacagg
3781 caaagaggcg aattgtagaa ttgttagatg gcaatagtca ttaaaaacat agaaaaatga
3841 tgtctttaag tggagaattg tggaaggatt gtaacatgga ccatccaaat ttatggccgt
3901 atcaaatggt agctgaaaaa actatatttg agcactggtc tctcttggaa ttagatgtta
3961 tatcaaatga gcatctcaaa tgttttctgc agaaaaaaat aaaaagattc taacaaaaaa
4021 aaaaaaaaaa
//