LOCUS       BC035143                2641 bp    mRNA    linear   HUM 14-MAR-2007
DEFINITION  Homo sapiens tigger transposable element derived 1, mRNA (cDNA
            clone MGC:43254 IMAGE:5264460), complete cds.
ACCESSION   BC035143
VERSION     BC035143.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2641)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 73 Row: j Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22209000.
FEATURES             Location/Qualifiers
     source          1..2641
                     /db_xref="H-InvDB:HIT000093724"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:43254 IMAGE:5264460"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2641
                     /gene="TIGD1"
                     /gene_synonym="EEYORE"
                     /db_xref="GeneID:200765"
                     /db_xref="HGNC:HGNC:14523"
     CDS             714..2489
                     /gene="TIGD1"
                     /gene_synonym="EEYORE"
                     /codon_start=1
                     /product="tigger transposable element derived 1"
                     /protein_id="AAH35143.2"
                     /db_xref="GeneID:200765"
                     /db_xref="HGNC:HGNC:14523"
                     /translation="MASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLR
                     QTVSQVVNAKEKFLKEVKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQ
                     SLIQNKALTLFNSMKAERGVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVE
                     AAASYPEALAKIIDEGGYTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDR
                     LTLLLGANAAGDFKLKPMLIYHSENPRALKSYTKSTLPVLYKWNSKARMTAHLFTAWF
                     TEYFKPTVETYCSEKKIPFKILLLIGNAPSHPRALMEIYEEINVIFMPANTTSILQPM
                     DQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWE
                     EVKLSTLTGVWKKLIPTLIDDYEGFKTSVEEVSADVVEIAKELELEVEPEDVTELLQS
                     HDKTLTDEELFLMDAQRKWFLEMESTPGEDAVNIVEMTTKDLEYYINLVDKAAAGFER
                     IDSNFERSSTVGKMLSNSIACYREIFHERKSQLMRKASPMSYFRKLPQPPQPSAATTL
                     TSQQPSTSRQDPPPAKRVRLTEGSD"
BASE COUNT          790 a          557 c          595 g          699 t
ORIGIN      
        1 agcggggcta tctcgggacg ccagctcagg gcggctgcgc agagggctgg actcagcggc
       61 ggagctggct gctggcctca gttctgcctc tgtccaggtc cttgtgaccc gcccgctctc
      121 ctaagggagc gtgtcctggc cccctcccgc agcggctcgg aaaaaaggca gcaccgcgtc
      181 gttgacggcg cgggctctgg actcgctgct tggtaaaaac cttcctcttc ctccagtgcg
      241 ggacgcactc tctggtatct cttttgacct cccggaggct ttcctttgtc ggtcgcggcg
      301 ccactgtact atggcatacc tcgttttatt acgcttcgca gatagggcat tctgaaaaca
      361 aatggagggt ttgtggcagc cctgagtcca gcaattgtat cagcgccatt tttccaacag
      421 catgtgctca cttggtgtct ctgtgttaca ttttggtaat tctcaaaata tttaaaactc
      481 tttcatgatt tctgtgtctg ttatggtgat ctatgatcag tgatctttga tgttgctatt
      541 gtcattgttt tggggtgcca catacagcgt cttttataag acgtggaact taatgttgtg
      601 tgtgttctga ccgctccacc cacagaccgt tccccatctc tctccctctt cttgggcctc
      661 cctattccct gagacacaac aatattgaga ttaggcgaat taatgactct gcaatggcct
      721 ctaagtgctc aagtgaaagg aagagtcgca catctctcac tttaaatcaa aaactagaaa
      781 tgattaaact gagtgaggaa ggtatgtcaa aagccgagat aggccgaagg ctaggcctcc
      841 tgcggcaaac agttagccaa gttgtaaatg caaaggaaaa gttcttgaag gaagttaaaa
      901 gtgctactcc aatgaacaca cgaatgataa gaaagcgaaa cagccttatt gctgatatgg
      961 agaaagtttt agtggtctgg atagaagatc agaccagccg caacattccc ttaagccaaa
     1021 gcctaatcca gaacaaagcc ctaactctct tcaactctat gaaagctgag agaggtgtgg
     1081 aagctgcaga agaaaagttt gaagctagca gaggttggtt catgaggttt aaggaaagaa
     1141 gccatttcca taacataaaa gcacaaggtg aagcagcaag tgctgatgta gaagctgcag
     1201 caagttatcc agaagcttta gctaagatca ttgacgaagg tggctacact aaacaacaga
     1261 ttttcaatgt agatgaaaca gccttctatt ggaagaagat gccatctaga actttcatag
     1321 ctagagagga gaagtcagtg cctggcttca aagcttcaaa ggacaggctg actctcttgt
     1381 taggggctaa tgcagctggt gactttaagt tgaagccaat gcttatttac cattctgaaa
     1441 atcctagggc ccttaagagt tatactaaat ctactctacc cgtgctatat aaatggaaca
     1501 gcaaagcccg gatgacagca catctgttta cagcatggtt tactgaatat tttaaaccca
     1561 ctgttgagac ctactgctca gaaaagaaga ttcctttcaa aatattactg ctcattggca
     1621 atgcccctag tcatccaaga gctctgatgg agatatacga ggagattaat gttattttca
     1681 tgcctgctaa cacaacatcc attctgcagc ccatggatca aggggtaatt tcgaccttca
     1741 agtcttatta tttgagaaat acatttcata aggctctagc tgccatggat agtgatgtct
     1801 ctgatggatc tgggcaaagc aaattgaaaa ccttctggaa aggattcacc attttagatg
     1861 ccattaaaaa cattcgtgat tcatgggagg aggtcaaatt gtcaacatta acaggagttt
     1921 ggaagaagtt gattcccacc ctcattgatg actatgaggg gttcaagact tcagtggagg
     1981 aagtaagtgc agatgtggtg gaaatagcaa aagaactaga attagaagta gagcctgaag
     2041 atgtaactga attgctgcaa tctcatgata aaactttaac agatgaggag ttgtttctta
     2101 tggatgcgca aagaaagtgg tttcttgaga tggaatctac acctggtgaa gatgctgtga
     2161 acattgttga aatgacaaca aaggatttag aatattacat aaacttagtt gataaagcag
     2221 cagcagggtt tgagaggatt gactccaatt ttgaaagaag ctctactgtg ggcaaaatgc
     2281 tatcaaacag catcgcatgc tacagagaaa tctttcatga aaggaagagt caactcatgc
     2341 gaaaagcttc accgatgtct tattttagga aattgccaca gccaccccaa ccttcagcag
     2401 ccaccaccct gaccagtcag caaccatcaa cctcgaggca agaccctcca ccagcaaaaa
     2461 gagtacgact caccgaaggc tcagattgat aatcagcatt ttttagcaat aaagtatttt
     2521 taaatttagg tatgtatatt gttttattag acaatgctat tgcactcttg ctggtctaca
     2581 gtatagtgta aacataactt ttatatgcat tgggaaacca aaaacaaaaa aaaaaaaaaa
     2641 a
//