LOCUS BC034959 4900 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens acyl-CoA synthetase long-chain family member 4, mRNA
(cDNA clone MGC:26481 IMAGE:4824121), complete cds.
ACCESSION BC034959
VERSION BC034959.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034959.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758331.
FEATURES Location/Qualifiers
source 1..4900
/db_xref="H-InvDB:HIT000051266"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26481 IMAGE:4824121"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4900
/gene="ACSL4"
/gene_synonym="ACS4"
/gene_synonym="LACS4"
/db_xref="GeneID:2182"
/db_xref="HGNC:HGNC:3571"
/db_xref="MIM:300157"
CDS 180..2192
/gene="ACSL4"
/gene_synonym="ACS4"
/gene_synonym="LACS4"
/codon_start=1
/product="acyl-CoA synthetase long-chain family member 4"
/protein_id="AAH34959.1"
/db_xref="GeneID:2182"
/db_xref="HGNC:HGNC:3571"
/db_xref="MIM:300157"
/translation="MAKRIKAKPTSDKPGSPYRSVTHFDSLAVIDIPGADTLDKLFDH
AVSKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWMNYLEVNRRVNNFGSGLT
ALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGKEAVVHGLNESEASYL
ITSVELLESKLKTALLDISCVKHIIYVDNKAINKAEYPEGFEIHSMQSVEELGSNPEN
LGIPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYIG
YLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVP
EIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLCNLLLFKKVKALLG
GNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVGAP
LICCEIKLKDWQEGGYTINDKPNPRGEIVIGGQNISMGYFKNEEKTAEDYSVDENGQR
WFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKS
DQSYVISFVVPNQKRLTLLAQQKGVEGTWVDICNNPAMEAEILKEIREAANAMKLERF
EIPIKVRLSPEPWTPETGLVTDAFKLKRKELRNHYLKDIERMYGGK"
BASE COUNT 1580 a 797 c 982 g 1541 t
ORIGIN
1 ggtctccgcc gcgcgctcct cctcgtccca gcgctagcgg gcacgcggtt cctttttgcg
61 agctttccga gtgccaggcg ccggccggct gcgaagacgc ggtgggccgc ccctccgatt
121 gaaatcacag aagatattcg tgttcttctt aagagaaaaa gaggacattt aaaaacgcta
181 tggcaaagag aataaaagct aagcccactt cagacaaacc tggaagtcca tatcgctctg
241 tcacacactt cgactcacta gctgtaatag acatccctgg agcagatact ctggataaat
301 tatttgacca tgctgtatcc aagtttggga agaaggacag ccttgggacc agggaaatcc
361 taagtgaaga aaatgaaatg cagccaaatg gaaaagtttt taagaagtta attcttggga
421 attataaatg gatgaactat cttgaagtga atcgcagagt gaataacttt ggtagtggac
481 tcactgcact gggactaaaa ccaaagaaca ccattgccat cttctgtgag accagggccg
541 aatggatgat tgcagcacag acctgcttta agtacaactt tcctcttgtg actttatatg
601 ccacacttgg caaagaagca gtagttcatg ggctaaatga atctgaggct tcctatctga
661 ttaccagtgt tgaacttctg gaaagtaaac ttaagactgc attgttagat atcagttgtg
721 ttaaacatat catttatgtg gacaataagg ctatcaataa agcagagtac cctgaaggat
781 ttgagattca cagcatgcaa tcagtagaag agttgggatc taacccagaa aacttgggca
841 ttcctccaag tagaccaacg ccttcagaca tggccattgt tatgtatact agtggttcta
901 ctggccgacc taagggagtg atgatgcatc atagcaattt gatagctgga atgacaggcc
961 agtgtgaaag aatacctgga ctgggaccga aggacacata tattggctac ttgcctttgg
1021 ctcatgtgct agaactgaca gcagagatat cttgctttac ctatggctgc aggattggat
1081 attcttctcc gcttacactc tctgaccagt ccagcaaaat taaaaaagga agcaaaggag
1141 actgtactgt actgaagccc acacttatgg ctgctgttcc ggaaatcatg gatagaattt
1201 ataagaatgt tatgagcaaa gtccaagaga tgaattatat tcagaaaact ctgttcaaga
1261 tagggtatga ttacaaattg gaacagatca aaaagggata tgatgcacct ctttgcaatc
1321 tgttactgtt taaaaaggtc aaggccctgc tgggagggaa tgtccgcatg atgctgtctg
1381 gaggggcccc gctatctcct cagacacacc gattcatgaa tgtctgcttc tgctgcccaa
1441 ttggccaggg ttatggactg acagaatcat gtggtgctgg gacagttact gaagtaactg
1501 actatactac tggcagagtt ggagcacctc ttatttgctg tgaaattaag ctaaaagact
1561 ggcaagaagg cggttataca attaatgaca agccaaaccc cagaggtgaa atcgtaattg
1621 gtggacagaa catctccatg ggatatttta aaaatgaaga gaaaacagca gaagattatt
1681 ctgtggatga aaatggacaa aggtggtttt gcactggtga tattggagaa ttccatcccg
1741 atggatgttt acagattata gatcgtaaga aagatctagt gaagttacaa gcaggagagt
1801 atgtatctct tgggaaagtg gaagctgcac tgaagaattg tccacttatt gacaacatct
1861 gtgcttttgc caaaagtgat cagtcctatg tgatcagttt tgtggttcct aaccagaaaa
1921 ggttgacact tttggcacaa cagaaagggg tagaaggaac ttgggttgat atctgcaata
1981 atcctgctat ggaagctgaa atactgaaag aaattcgaga agctgcaaat gccatgaaat
2041 tggagcgatt tgaaattcca atcaaggttc gattaagccc agagccatgg acccctgaaa
2101 ctggtttggt aactgatgct ttcaaactga aaaggaagga gctgaggaac cattacctca
2161 aagacattga acgaatgtat gggggcaaat aaaatgttgt tgtcttattg acagttgtgc
2221 aggaggtagc ctggtggttt tcaacctcta gaattttaag cctttgttga actgttagaa
2281 tgtaaggtat atcattctaa agatagagta aaaagaaaac aaaaccaaaa gttattaaaa
2341 ttgttgtccg gtttacttta acttagtttt gcatagttct agtgcagctg aaattgaaaa
2401 gttatttccc tttagctgtg ttattataga gcagaaattc tgtttttaaa aattagccta
2461 agatatactt gtttttgtaa agaaaaatat ttaatgttga acaaaataaa ttggagttgg
2521 agtagaatgt agtttgagga aatttgcagc ttccaatgcc tcttgtcttc ctatttcaga
2581 agtttaaata ttaagcatga cagaaaatat gtattaacac tactcaaagc aaaagtgctg
2641 cagggcttta aaattctctt ccaaccattt atcttgaagg aaaaattcaa tagtaatata
2701 atacacaaaa tcaaataata ccttagaagg tattaagatt ataattgttg cataggttag
2761 atatagagtc attgtaatgt tgtgaataat tacagtgcct aaaataagaa tagaacaaca
2821 tatacaacac caaaaaatat ctagtaatat atttaaaggg aaattgagct gctttttttg
2881 aaactttgag atctaaaaat aactgtaatt atttgaatga ctaagaggaa agtacatttt
2941 ttgaaatgct gaaaattgcc tttctgtgtt tattcaaact gaaaagctga gaccaagagc
3001 aaggaaggta aaaagttaac aggcaaacat tttctcttag aaaaggtgat aaaatcataa
3061 gtatttggaa ttagaaccct tgcacagcac tgaacctggg aaagagattt aaactctgaa
3121 tttatctttg ataacaggga ttgattttaa aatgtacatg tattaaatta catttgtaat
3181 ttaaggtctg tttgctgttg ctgattttat tcttgatcag tagtttgcat ttcagaaagc
3241 ctttcatttt gctttaattt tagcaaagcg ggttataatg aatgacttcc ccaatatctt
3301 gcttgaactt acaggtgatt aacttggatg agttttggga agttaaaggg aagaaaacac
3361 tgttatcatt ttttcctgtt tgggaagagc ttagaaactg gaaatactag atttgggaga
3421 agggcagagt tacttgataa gggactgatg tttgtgcagt aacttgggag tgtggtttct
3481 ttttgaatct ttaattaaaa cctgggatta tatatccctg ataaatattc acacttgaac
3541 catagttact gtaaaatgca aaaaatctta atactgttat tctttgcact ttttcttaat
3601 cattttttat atatatgcat atatatatgt gtgtgtgtgt gttgcttatg ttgttttgta
3661 cagatgtggg ccaccattgc aacaaaatac attctttttg ctctaaaata tttatgaaga
3721 aaatacttaa atgttatgta tatggtggta ataagggaaa aatcaagtat tataaacaag
3781 aatgaaggtt tttgtaaaga tttctgttca gcgttttgca aggtaaaatt ttaggcaagt
3841 tttccctgaa gttatgtgta tgtaagtatt ctcattcttc ccaacttgcc tttgaagagt
3901 gaaataccat tattatcaag tagactactg ttcagctttt attcctgccc tgctgtttat
3961 cccttaagaa tgagtttctt agacttttcc aatatgtgat tttttttccc atttagaatg
4021 gtgattttaa atgtgtgagt gcatgtacta tcttatctca gatatttgca cccccaatct
4081 gcccccaact cccaaaagct agaacactgc caactgatct gttataggtc ctttagaaac
4141 acataattaa cacttaaggt tgggtgctgc taattctttg caaaaatcca aatattgtta
4201 agggaccagg gagatgccac taccccttga ttttccatct aaaaatatac atgtttatgt
4261 aaacaaatct ttccatatcc atagtgactt ttcaagtatt taagcctaaa gattttgatc
4321 tcacattttt atacctgttt aaattgctca cagttattac atacacatca gccatcaact
4381 aaagttgtac tttaaaaatt tactacaata tgtacatttc taagtcaaac acttgtgact
4441 tttgctttaa ttccatgaat gttcctgcct ccttgatatt tgtatttatt ctttttttct
4501 ctagagtaga ggtataattg tgtgatattt cagaaataca gataaatgat tcaaaaagtc
4561 acagttaagg agaatcatgt ttctttgatc atgaataact gattagtaag tcttgcctat
4621 attttcctga tagcatatga caaatgtttc taaggtaaca agatgagaac agataaagat
4681 tgtgtggtgt tttggatttg gggagaaata ttttaatttt taaatgcagt tacaaattat
4741 aatgtattca tatttgtact ttctgttaaa atgcatgatt gcagaattgt ttagattttg
4801 tgtttattct tgatgaaaag ctttgtttgt tcttgttttt aagtttgcac tcaaatctta
4861 agaaataaat ccacccatgt taccaaaaaa aaaaaaaaaa
//