LOCUS BC034852 1378 bp mRNA linear ROD 21-JUL-2006
DEFINITION Mus musculus inducible T-cell co-stimulator, mRNA (cDNA clone
MGC:41104 IMAGE:1364228), complete cds.
ACCESSION BC034852
VERSION BC034852.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Marcello Bento Soares, Ph.D.
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 67 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8567361.
FEATURES Location/Qualifiers
source 1..1378
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="MGC:41104 IMAGE:1364228"
/tissue_type="Mammary gland"
/clone_lib="Soares_mammary_gland_NbMMG"
/lab_host="DH10B"
/note="Vector: pT7T3-Pac"
gene 1..1378
/gene="Icos"
/gene_synonym="AILIM"
/gene_synonym="H4"
/gene_synonym="Ly115"
/db_xref="GeneID:54167"
/db_xref="MGI:MGI:1858745"
CDS 33..635
/gene="Icos"
/gene_synonym="AILIM"
/gene_synonym="H4"
/gene_synonym="Ly115"
/codon_start=1
/product="inducible T-cell co-stimulator"
/protein_id="AAH34852.1"
/db_xref="GeneID:54167"
/db_xref="MGI:MGI:1858745"
/translation="MKPYFCRVFVFCFLIRLLTGEINGSADHRMFSFHNGGVQISCKY
PETVQQLKMRLFREREVLCELTKTKGSGNAVSIKNPMLCLYHLSNNSVSFFLNNPDSS
QGSYYFCSLSIFDPPPFQERNLSGGYLHIYESQLCCQLKLWLPVGCAAFVVVLLFGCI
LIIWFSKKKYGSSVHDPNSEYMFMAAVNTNKKSRLAGVTS"
BASE COUNT 386 a 338 c 271 g 383 t
ORIGIN
1 ggaggagaag actgcaactg ctcctggcag acatgaagcc gtacttctgc cgtgtctttg
61 tcttctgctt cctaatcaga cttttaacag gagaaatcaa tggctcggcc gatcatagga
121 tgttttcatt tcacaatgga ggtgtacaga tttcttgtaa ataccctgag actgtccagc
181 agttaaaaat gcgattgttc agagagagag aagtcctctg cgaactcacc aagaccaagg
241 gaagcggaaa tgcggtgtcc atcaagaatc caatgctctg tctatatcat ctgtcaaaca
301 acagcgtctc ttttttccta aacaacccag acagctccca gggaagctat tacttctgca
361 gcctgtccat ttttgaccca cctccttttc aagaaaggaa ccttagtgga ggatatttgc
421 atatttatga atcccagctc tgctgccagc tgaagctctg gctacccgta gggtgtgcag
481 ctttcgttgt ggtactcctt tttggatgca tacttatcat ctggttttca aaaaagaaat
541 acggatccag tgtgcatgac cctaatagtg aatacatgtt catggcggca gtcaacacaa
601 acaaaaagtc tagacttgca ggtgtgacct cataagctgg aacacccgga cccacagagg
661 aaacgcatgg actagttccc ctgaaacttg aatggagaaa ttcttctatt ttctggacca
721 cagggcacct gacttgattt aactacagac aacattctgc tggtgttttg tttgtctgga
781 tcagtgacta tcagtcattc agaatttcag cagactgccc tgggtttgct gagtcctttt
841 aagatgaacc ccttcttaag gaagacccag ctcatatata ttcaacaaac agacctcact
901 gggatagaat gcccctctct ccgtgcctga ttctagctat gcactggcca ggaaaacaaa
961 catatctcca gcattttttt acaaaaaatg ccgagggtat gaatctgtaa agcacacagg
1021 cagccaatgg ccaccatctg tcctcatttt tcagattcca ttttctttcc atggagatca
1081 gcattctttc tagaatcaga cagtagaggg agatgcttca caacagaagc gcttgtgttt
1141 ctgcgatttt gatgtatata ctttatcgaa ctcatgcatt agaaccaaca tgctctcttc
1201 caattcctag actctagctg atcactgctt cagggcttag atgcctgctc ttgccttcaa
1261 atttcccctt aaagatatgt ccacatgtct acttggcagc ctgctgccac tccaaatagg
1321 aagctcagcc tacattccct cccacccctg ttgctcaaaa aaaaaaaaaa aaaaaaaa
//