LOCUS BC034262 3503 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus caspase 2, mRNA (cDNA clone MGC:25295 IMAGE:4460089),
complete cds.
ACCESSION BC034262
VERSION BC034262.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3503)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3503)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Gilbert Smith, Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 31 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6680847.
FEATURES Location/Qualifiers
source 1..3503
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:25295 IMAGE:4460089"
/tissue_type="Mammary tumor. Metallothionien-TGF alpha
model. 10 month old virgin mouse. Taken by biopsy."
/clone_lib="NCI_CGAP_Mam1"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3503
/gene="Casp2"
/gene_synonym="Caspase-2"
/gene_synonym="ICH-1"
/db_xref="GeneID:12366"
/db_xref="MGI:MGI:97295"
CDS 84..1442
/gene="Casp2"
/gene_synonym="Caspase-2"
/gene_synonym="ICH-1"
/codon_start=1
/product="caspase 2"
/protein_id="AAH34262.1"
/db_xref="GeneID:12366"
/db_xref="MGI:MGI:97295"
/translation="MAAPSGRSQSSLHRKGLMAADRRSRILAVCGMHPDHQETLKKNR
VVLAKQLLLSELLEHLLEKDIITLEMRELIQAKGGSFSQNVELLNLLPKRGPQAFDAF
CEALRETRQGHLEDLLLTTLSDIQHVLPPLSCDYDTSLPFSVCESCPPHKQLRLSTDA
TEHSLDNGDGPPCLLVKPCTPEFYQAHYQLAYRLQSQPRGLALVLSNVHFTGEKDLEF
RSGGDVDHTTLVTLFKLLGYNVHVLHDQTAQEMQEKLQNFAQLPAHRVTDSCVVALLS
HGVEGGIYGVDGKLLQLQEVFRLFDNANCPSLQNKPKMFFIQACRGDETDRGVDQQDG
KNHTQSPGCEESDAGKEELMKMRLPTRSDMICGYACLKGNAAMRNTKRGSWYIEALTQ
VFSERACDMHVADMLVKVNALIKEREGYAPGTEFHRCKEMSEYCSTLCQQLYLFPGYP
PT"
BASE COUNT 809 a 824 c 814 g 1056 t
ORIGIN
1 tgggggaggg atgcgggggc tggcgcggcc cagcgtttgt ttgttttgtg ggtggtgcgt
61 gtgcagcccg ggaaaagctg gaaatggcgg cgccgagcgg gaggtcgcag tcctccctgc
121 acaggaaggg gctgatggcg gctgacagga ggagcaggat tttggcagtg tgtggaatgc
181 atcctgacca ccaggaaaca ctgaaaaaga atcgagtggt gctggccaag cagctgctgc
241 tgagcgagct gttagaacac ctcctagaga aggacattat cactttggaa atgagggagc
301 tcatccaggc caaagggggc agtttcagcc agaatgtgga actcctcaac ctgctgccaa
361 agagaggacc ccaggctttt gatgccttct gtgaagccct gcgggagacc aggcagggtc
421 acttggaaga cttactgctc acaaccctct cagatattca gcacgtactc ccaccgttga
481 gctgtgacta tgacacaagt ctccctttct cggtgtgtga gtcctgccct cctcacaagc
541 agctccgcct atccacagat gctacggaac actccttaga taatggtgat ggtcctccct
601 gtcttctggt gaagccatgc actcctgagt tttaccaggc acactaccag ctggcctata
661 ggttgcaatc tcagccccgt ggcttggcac tggtgctgag caatgtgcac ttcactggag
721 agaaagacct ggaattccgc tctggagggg atgtggacca cactactcta gtcaccctct
781 tcaagctttt gggctacaat gtccatgtgc tacatgacca gaccgcacag gaaatgcaag
841 agaaacttca gaattttgca cagttacctg cacaccgggt cacagactcc tgcgtagtgg
901 cactcctctc acatggtgtg gaaggtggca tctatggtgt agatggcaaa ctgcttcagc
961 tccaagaggt ttttcgactt tttgacaatg ctaactgtcc aagtctacag aacaagccaa
1021 aaatgttctt catccaagca tgtcgtggag atgagacaga tagaggtgtc gaccagcaag
1081 atggaaagaa ccacacacaa tcccctggat gtgaggagag tgatgctggc aaagaggagt
1141 tgatgaagat gagactgcct actcgctcag acatgatatg tggctatgct tgccttaaag
1201 gtaatgctgc catgcggaac accaaacggg gttcctggta cattgaggcc ctcactcagg
1261 tgttctctga aagagcttgt gacatgcacg tggccgacat gcttgttaag gtgaatgccc
1321 ttatcaagga gcgtgaaggc tatgcccctg gcacagaatt ccaccgatgc aaggagatgt
1381 ctgagtactg tagtactctg tgccagcaac tctacctgtt cccaggctac ccacccacgt
1441 gatgccgcct gctattcctg ctgttggagg ccactggacc actgggggca caatggagac
1501 ttctcttcag aatggttttt gttctgtcta ccctctcagg gatatgagat tctcccaggc
1561 ttgtttcctg tcagccatct ctgtctttgg gtatgaaaca taaggatggc tcctccggtg
1621 tcgtgttctc tacctataga gccagctctg aatggatatg ttaccagaag cattttagct
1681 acagcctaga aaatgacatt gtgaacacag tattattgtg ggaaaagggc atttggattt
1741 ctcaatgttt gtgatatttt tgttcccaag gcatcttagg agtacttgga tcatagcttt
1801 tttttttttt cctaaatcag ttaaggagtc tcagagatca tctccttttt tttccatatc
1861 tacaacctca tttttcccac agtggagatt tggaagctgt cccaatttaa tgtaggtgtt
1921 ttcatctgtc atgaagggac agatgagatc ctactacttg cgaagtttct atgcatacct
1981 ttaagttcag gccctaggtg aaggacagtc cctcagcctt tccattggtt cctttgtgtt
2041 cagtgcaccc agcctttgaa cagagcctag ggtctgtatg ccatgacact ggaagtcata
2101 gaaatttccc tggtcatgct ttgtttgaac tgtcactgaa tgaaccttat cgggcataac
2161 tacatgaaaa tgcagtgaca gctgagtgtg ctgtgtctca cactatcacc cgtcatcagg
2221 atgtctctcc ttccttactg tggcttctgc atgcacttac actgtacttg acggctggcc
2281 tccagggtct ctcttgcttt gtactggttc ccctctttac cttcaccatt cgctgcttct
2341 gccaagtctg tgaagccgtc ctttgtagga tgtttcttgc cacttacgct gtactgtagt
2401 tgcttattca ttctgccttc tgcttcagcg tgaggcttct ttggttttct gtggcagcgt
2461 ctcccttctc attgtttctc tgtgttttag tggggatagt accatatgtg atataaccta
2521 gaagcacttg tctctgctct tatgaaactt gcttattctt gaaaaccttc tgcatttcca
2581 ttttttcctc tcttccaatt tattctccat gtaacagagt agtttggttt ttaaaatatc
2641 tggtgatgtc attctcttgc ttagaacact agcttcctgt tacacttcat ctaaaatgca
2701 aattcttaca cccagcttac gagatctggc tcataccttc cctttggatc tcattaaatg
2761 gtgatttctc actatgctcc agcccctctt aggtcctcat ctccgtcttg caggtgttct
2821 gaactctcct ttggctagtc tctgattttt gagtctggcg gaggcctctt gaccatgctg
2881 cccatgctgt ctactgtgcc tccttatgag ggcatcatgt tggtctctgt tgtgcttact
2941 gcaggctgta atggcacttt tgcttgtttc acttgttccc tctgaggctg aatgctccaa
3001 gagagtggga actgtgcttc ttacttactg atatccagta actggcactt actaggtctt
3061 catgaatgtt tcctgagtaa aggaaggaga ccagcagcta accttagtta gagcctacct
3121 tttgcagttt ctaaattgct attatagtgt acagttcaat tagtatatgg gttttttttt
3181 ccaggtgttt tatttttatc cactgttttg ttgttgtttt tttatatttt ctacatatca
3241 cgtgtgagac aacttctttc acatctccat agtgcccagc aaatttgagg cctatggtag
3301 ttgaggtgct caactaatgt ttgttgtatg aaccaagtgg tttgaagact tgctgccaaa
3361 ttctgccttt tgggtcagta taggatgcat aagtggtaga atcttcacac ttcccactgc
3421 caagattttg tattgccatc aggtgccaaa taaatgttga tacttattac tgaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaa
//