LOCUS BC034048 4444 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens secretory carrier membrane protein 1, mRNA (cDNA clone
MGC:26822 IMAGE:4814951), complete cds.
ACCESSION BC034048
VERSION BC034048.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4444)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4444)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33598919.
FEATURES Location/Qualifiers
source 1..4444
/db_xref="H-InvDB:HIT000042061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26822 IMAGE:4814951"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4444
/gene="SCAMP1"
/gene_synonym="SCAMP"
/gene_synonym="SCAMP37"
/db_xref="GeneID:9522"
/db_xref="HGNC:HGNC:10563"
/db_xref="MIM:606911"
CDS 24..1040
/gene="SCAMP1"
/gene_synonym="SCAMP"
/gene_synonym="SCAMP37"
/codon_start=1
/product="secretory carrier membrane protein 1"
/protein_id="AAH34048.1"
/db_xref="GeneID:9522"
/db_xref="HGNC:HGNC:10563"
/db_xref="MIM:606911"
/translation="MSDFDSNPFADPDLNNPFKDPSVTQVTRNVPPGLDEYNPFSDSR
TPPPGGVKMPNVPNTQPAIMKPTEEHPAYTQIAKEHALAQAELLKRQEELERKAAELD
RREREMQNLSQHGRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHA
VTLFLNIFGCLAWFCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRF
FVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAV
ISLVMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASTAASSAAQNAFK
GNQI"
BASE COUNT 1406 a 706 c 772 g 1560 t
ORIGIN
1 gggtgacgcc gagagccaga gagatgtcgg atttcgacag taacccgttt gccgacccgg
61 atctcaacaa tcccttcaag gatccatcag ttacacaagt gacaagaaat gttccaccag
121 gacttgatga atataatcca ttctcagatt ctagaacacc tccaccaggc ggtgtgaaga
181 tgcctaatgt acccaataca caaccagcaa taatgaaacc aacagaggaa catccagctt
241 atacacagat tgcaaaggaa catgcattgg cccaagctga acttcttaag cgccaggaag
301 aactagaaag aaaagccgca gaattagatc gtcgggaacg agaaatgcaa aacctcagtc
361 aacatggtag aaaaaataat tggccacctc ttcctagcaa ttttcctgtc ggaccttgtt
421 tctatcagga tttttctgta gacattcctg tagaattcca aaagacagta aagcttatgt
481 actacttgtg gatgttccat gcagtaacac tgtttctaaa tatcttcgga tgcttggctt
541 ggttttgtgt tgattctgca agagcggttg attttggatt gagtatcctg tggttcttgc
601 tttttactcc ttgttcattt gtctgttggt acagaccact ttatggagct ttcaggagtg
661 acagttcatt tagattcttt gtattcttct tcgtctatat ttgtcagttt gctgtacatg
721 tactccaagc tgcaggattt cataactggg gcaattgtgg ttggatttca tcccttactg
781 gtctcaacca aaatattcct gttggaatca tgatgataat catagcagca cttttcacag
841 catcagcagt catctcacta gttatgttca aaaaagtaca tggactatat cgcacaacag
901 gtgctagttt tgagaaggcc caacaggagt ttgcaacagg tgtgatgtcc aacaaaactg
961 tccagaccgc agctgcaaat gcagcttcaa ctgcagcatc tagtgcagct cagaatgctt
1021 tcaagggtaa ccagatttaa gaatcttcaa acaatacact gttacctttt gactgtacct
1081 ttttctccag ttactgtatt ctacaaatat ttttatgttc aaaacacaca gtacagacag
1141 catggatatt tcctgttcac ttgtgcatgg gctaaaacca ggaaaacttc cttgtcttat
1201 tactttacct aatagtttct taatatttca gtgccccttg cagaaaaaat attacatgct
1261 aaataaatat tctccatatt tttgggggat gacattcagt gaattatttc agtggtgacc
1321 cactgaaaat taataatggt acttatgatt aaaaacgcat ttaatactaa ctgcagtagt
1381 tctttcaaga atctttagag ataaggattg cacattggaa aagtaaacca tgtttcattc
1441 ctttttccct atttatattg aaagaaatag gccagcagag acttagggat tttaaattgg
1501 cttgcttttt agctgtttca gtcaccagtg aagagcctat gtgcattttg tagtagataa
1561 tgtaaaattt gtcatctttt tcttttcttt tttttagaat agctgatatt ttgataacaa
1621 tctctaattt gcatgggcac cacatttctt atattaaaag aattagtgtt ttggcttctg
1681 tactgcttat ggttgtagga ttcaggggtt aatggaatca cagaaatgat attctgcaag
1741 aatttctttt aaataaaaag tttgggggtg caatataaga agtttatata atatgcagta
1801 cattatccaa aagagaaggt agttaatgca gtagaaagta gtggtaataa ttccttttta
1861 aaaaaatttc ggtagtcata tagtaacatt ttgctatatg aaaactttgg tatattctgt
1921 ggttacaact aagattgtgt ctggcagctc ttttttgggg atgtgtgtgt gtgattttta
1981 acagaggtat taaaggctag cctaactgtt gtctaaaaag attgtacagt atttaaggga
2041 ttttcctttt agcttttcat ctccagtggc attaaacata aaaagaccct ggcatttttt
2101 cacatacttg aatccctaaa tgcacctgtc tttcactttt tgagacagac tgaatatatc
2161 taaaatttcc agcaataaaa aaaaaagcat ttaacttgca ccaagcaaga aaatataaat
2221 acagttaact gcattaagat aatcacgtta aaattgttac tatgcagcac agaacttcat
2281 tcttatagta ttcttgggtt caacctttga atcaatttta ccactgatta aataaatgac
2341 tcaaagacat ctgtaagtca tgctgctgtg ttttgaaagt ctttaactaa attaagattg
2401 cagaatgata gtgattattc aattagattt taagtaagga ttgtgatatt agaggctgga
2461 aatccttatt ttttaaaaaa tcagataggc ataaatagtt aaatcacttt tcattctccc
2521 caaacctgta gttacagaaa aagttttatg ctagaggtgg gatgccaagt tttcactatc
2581 catgaagcag cgctgcatgt cactaggtaa cacagatcca tccagatggt gtttacattt
2641 gatttatttg ggatcttatt gacatcaggt atacttggaa gacatttctt ttattcttca
2701 gcgtatgaat ttaaagctat tttttgtaaa tatttctaat cagcgataat ttctacctat
2761 gttctcaacc aacttagcca gtttgttttt cagagcctgt agtcttattg gaaatctatt
2821 ttatcagtgt gctttattga gtgtggattt tgcatacatt caaaacatta accacaaaat
2881 acagcaagtg cacctatatt caccattaac ttatatccca agtccatttt ttcctgtaca
2941 ctacaaacaa aagatatatt agagactttt gaaaaatgct gaaatacttt gcttcagaat
3001 tggaatgttt atattatgta gaaatcttca aaggtagcat tattaaatag caaagaataa
3061 ttagaaccca catatctttt tttgtgtgga tggggaaaat gttttaaaat ccagttattt
3121 aatatgagtt tgagagagaa aattgttttt taaaaatata tgtgcattga aatgatggca
3181 atgcttatag tatgatcaag tatgaaagga actttaaatt cttatattta cttttctctc
3241 agtaaattgt taaattttca ctcagcaaaa gattggcatt tgttaagtgt tctatattta
3301 gtactaaaat cacagtcatg aaatcatagt cataaaatgg tcttcacaca gcagtcatcc
3361 atgtcattta tcattttgta atattaaatt atggcaattt tatttcaaac taaagtttga
3421 acaccggaaa gtcattactc agtgatttgt aatttgggac ttggattatt tatctagaga
3481 tgtttgtata ttttgtcagt aactaatact gcgctgccat catggtgact gtcatggttc
3541 tacagaaatg ccctccatgt gtccctataa tgttgcatgt ttcagtgggt tggaagtttt
3601 gtatatttat tgtattaaca cagagtgtca taaaataaaa tgctgtttac tggatgtttg
3661 tttgtataat tttgaacact ataatagcaa ttcagagaca gacattgtta aaggtttgat
3721 gtatatagaa attccatgtt tgatttttta aaatatgtgt ataagtctgt catgtgctaa
3781 acaaaataat atgaaagacc tagttaaaaa ttctaaccaa tgtaaaatga ccatttttct
3841 gttgcattag acctttacag gtaatggaac atgagcttca cccatattaa atattttggc
3901 ccctttaagg tcaaaataca gatcatctag aagttagatt caaaatggaa aacctattca
3961 tggctcagat ttttcattgt gggttaaaaa tgggtgtctc tgtactagta ttgtatttat
4021 tcaattgaac ttgtattctg atttctatcc ttgctaccta ttgctgtttt atgtactgat
4081 gaaagtacct atttgtgtat attggatttt tcacttggtt agctaaagaa gatgtaaaaa
4141 tatctaaaat aatgttcatg gtgaatctta ttttgagaaa tacatgttaa aaaaggaaca
4201 gtattcttta ttttctgggt gttatattta aaaaagcaag tttggatttt tacacctaat
4261 ttactaggaa aatattttat tctgtaattc atgttaagat tatgtatggt ttgcatttta
4321 aggggattta tgttaggtta attagttgtt tctgtaaatc atttgtaata gcatagtgct
4381 ttttactcat tgctgtatct ttttctgaaa acactgttgt taacatctaa aaaaaaaaaa
4441 aaaa
//