LOCUS BC033563 2549 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens tubulin tyrosine ligase-like family, member 6, mRNA
(cDNA clone MGC:42621 IMAGE:4825815), complete cds.
ACCESSION BC033563
VERSION BC033563.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2549)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2549)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734745.
FEATURES Location/Qualifiers
source 1..2549
/db_xref="H-InvDB:HIT000051142"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42621 IMAGE:4825815"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2549
/gene="TTLL6"
/gene_synonym="FLJ35808"
/gene_synonym="TTL.6"
/db_xref="GeneID:284076"
/db_xref="HGNC:HGNC:26664"
CDS 91..1800
/gene="TTLL6"
/gene_synonym="FLJ35808"
/gene_synonym="TTL.6"
/codon_start=1
/product="tubulin tyrosine ligase-like family, member 6"
/protein_id="AAH33563.1"
/db_xref="GeneID:284076"
/db_xref="HGNC:HGNC:26664"
/translation="MEGCLGVAVLRKLSTFSAYLEDHSYNVEQIWRDIEDVIIKTLIS
AHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDSRLDKE
VKDGLLYDTLVLINLESCDKKKVLEEERQRGQFLQQCCSREMRIEEAKGFRAVQLKKT
ETYEKENCGGFRLIYPSLNSEKYEKFFQDNNSLFQNTVASRAREEYARQLIQELRLKR
EKKPFQMKKKVEMQGESAGEQVRKKGMRGWQQKQQQKDKAATQASKQYIQPLTLVSYT
PDLLLSVRGERKNETDSSLNQEAPTEEASSVFPKLTSAKPFSSLPDLRNINLSSSKLE
PSKPNFSIKEAKSASAVNVFTGTVHLTSVETTPESTTQLSISPKSPPTLAVTASSEYS
GPETDRVVSFKCKKQQTPPHLTQKKMLKSFLPTKSKSFWESPNTNWTLLKSDMNKPHL
ISELLTKLQLSGKLSFFPAHYNPKLGMNNLSQNPSLPGECHSRSDSSGEKRQLDVSSL
LLQSPQSYNVTLRDLLVIATPAQLDPRPCRSHASAMRDPCMQDQEAYSHCLISGQKGC
ERS"
BASE COUNT 707 a 698 c 605 g 539 t
ORIGIN
1 cagtctaagg gcacagaatg gaaaggttct cattttcctc ctccaatgag aattggcacc
61 ccaacagcag gccctgggcc ctcggctgtg atggaggggt gtctcggggt agcagtacta
121 aggaagctct ccaccttcag tgcatacttg gaggaccaca gctacaacgt ggagcagata
181 tggagggata ttgaggacgt catcatcaag accctcatct cggcccaccc catcatcagg
241 cataactacc acacctgctt ccccaaccac acactcaaca gcgcctgctt tgagatcctg
301 ggctttgaca ttttgttgga ccacaaactc aaaccctggc tgctggaggt caaccactct
361 ccaagcttct ccaccgactc tcggttggat aaagaggtga aagatggtct gctgtatgac
421 accttagtcc tgatcaacct ggaaagctgt gacaagaaga aagtcttgga ggaggagaga
481 caacgggggc agttcctgca gcagtgttgt tctcgggaga tgaggattga ggaagccaag
541 ggtttccggg ccgtgcagtt aaagaaaact gaaacgtatg agaaggaaaa ctgtggaggg
601 ttccgactga tttatcccag tctgaattcg gagaagtatg agaagttttt ccaggacaac
661 aactccctct tccagaatac tgttgcttcc agggctcggg aggagtatgc ccggcaactg
721 atccaggagc tgagactaaa acgggagaaa aagcccttcc aaatgaagaa gaaggtagag
781 atgcaggggg aatcggcagg cgagcaagtg agaaagaagg gcatgagggg ctggcaacag
841 aaacaacagc agaaagacaa ggccgccacc caagcctcca aacagtacat ccagccattg
901 acattagtat cctacacacc tgacttgctc ttgagtgtca gaggtgaaag gaaaaatgaa
961 acagacagca gcctcaacca ggaggctccc acggaggagg ccagctctgt tttccccaag
1021 ctgacgtctg cgaagccctt cagttctcta cccgatctga ggaatatcaa tctcagcagc
1081 tcgaagttgg agcccagtaa acccaacttc agcatcaagg aggccaagtc tgcctctgca
1141 gtgaacgtat tcactggcac tgtgcactta acctccgtag aaaccacccc agaatccacc
1201 acccaactct caatctcccc aaagtctccg ccaaccctgg ctgtgaccgc cagctctgag
1261 tacagtggcc cagagacgga cagggtggta tcctttaaat gcaagaagca gcagacccct
1321 ccacacttaa cccagaagaa aatgttaaaa tcttttctgc ccacaaaatc caagagcttc
1381 tgggagagtc cgaacacaaa ctggactttg ctaaagagtg acatgaacaa gccacatttg
1441 atatccgagc tactcaccaa gcttcaactg agtgggaagc tctccttctt cccagctcac
1501 tacaacccca agctggggat gaataacctg tcacaaaacc cctccctgcc tggggagtgc
1561 cactcccgca gtgacagctc tggcgagaag aggcagctgg atgtgtcctc cctcctcttg
1621 cagagtcctc agagctataa tgttactctg agggacctgc tggtgattgc cactccagcc
1681 caactggatc caaggccttg tagaagccac gcaagtgcta tgagggaccc atgtatgcag
1741 gatcaagaag catacagcca ttgcctgatc tctggccaaa aaggatgtga gaggagctag
1801 aatcagactg gatctctgcc acttttccct tcctacctct taacttgcag gaaacaatgt
1861 gtctcttccg gcagtgtctc cagtgttcac agaatcaact gaagttttgt ttgctcatct
1921 agatatactg gtcttccatt agttcctagt agcagcagtg gggccaacag ccctgcctct
1981 gttccctccc agttagctta cagtgctaca ggaccatgat ttctggggtt ggattggtgc
2041 tgccccagga cacactccag ttgccgtacc agtggcactt ctctgggttc ttcacatggc
2101 accatcatcc agaatactcc cccagataaa gcaacttcgg gagtagtgtt tcagagaagg
2161 actcatgatt tccaggagtc aaaagccctc agtccaccaa cagaactatg ccagttggtc
2221 ttcatctcca agataaaaga tgaggtcagg gatgggcatg gtgcataact ctgagccctg
2281 agtgagagaa ctgaggcagc tgcaacttca caaggtcaag gcccgacctc cgcccatccc
2341 caccagccca aagacttgcc acctcagtgc ccgagcatcc tctggtgacc tccctcacca
2401 gcccaactta atctcaccag tgaaaacaga ggtgaggcga gagtacccag cctgaagatg
2461 cttcttctat cagcctgcag aaatgttaca ctttcccttc aggcatccat taataaaaga
2521 aattgccatg cttaaaaaaa aaaaaaaaa
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