LOCUS BC033103 2097 bp mRNA linear HUM 08-JUN-2004
DEFINITION Homo sapiens peptidase (mitochondrial processing) alpha, mRNA (cDNA
clone IMAGE:5087539), partial cds.
ACCESSION BC033103
VERSION BC033103.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308012.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000041803"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5087539"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene <1..2097
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="KIAA0123"
/db_xref="GeneID:23203"
CDS <1..1583
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="KIAA0123"
/codon_start=3
/product="PMPCA protein"
/protein_id="AAH33103.2"
/db_xref="GeneID:23203"
/translation="KMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIP
LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYE
AKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKG
LDTVVALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYREN
TVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQ
PAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEED
FIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLC
IHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDV
GRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQ
TALSSKDGRLPRTYRLFR"
BASE COUNT 482 a 558 c 622 g 435 t
ORIGIN
1 gcaagatggc ggctgtggtg ctggcggcga cgcggttgct gcggggctcg ggttcttggg
61 gctgttcgcg gctgaggttt ggacctcctg cgtacagacg gtttagtagt ggtggtgcct
121 atcccaacat ccccctctct tctcccttac ctggagtacc caagcctgtt tttgctacag
181 ttgatggaca ggaaaagttt gaaaccaaag taaccacatt ggataatggg cttcgcgtgg
241 catctcagaa taagtttgga cagttttgta cagtaggaat tcttatcaat tcaggatcga
301 gatatgaagc gaaatacctt agtggaattg ctcacttttt ggaaaaattg gcattttcgt
361 ctactgctcg atttgacagc aaagatgaaa ttctgcttac gttggaaaag catgggggta
421 tctgtgactg ccagacatca agagacacca ccatgtatgc tgtgtctgct gatagcaaag
481 gcttggacac ggtggttgcc ttactggctg atgtggttct gcagccccgg ctaacagatg
541 aagaagtcga gatgacgcgg atggcggtcc agtttgagct ggaggacctg aacctgcggc
601 ctgacccaga gccacttctc accgagatga ttcatgaagc ggcttacagg gagaacacag
661 ttggcctcca ccgtttctgc cccacagaaa acgtagcaaa gatcaaccga gaggtgctgc
721 attcctacct gaggaactac tacactcccg accgcatggt gctggccggc gtgggcgtgg
781 agcacgagca tctggtggac tgtgcccgga agtacctcct gggggtccag ccggcctggg
841 ggagcgcaga ggccgtggat attgacagat ctgtggccca gtacactggg gggattgcca
901 agctagaaag agacatgtcc aatgtcagcc tgggcccgac ccccatcccc gagctcacgc
961 acatcatggt tggactggag agctgctcct tcctggagga ggacttcatc ccctttgcag
1021 tgttgaacat gatgatgggc ggaggtggct ccttctcggc tggtgggccc ggcaagggca
1081 tgttctccag gctctacctc aacgtgctca acaggcacca ctggatgtat aacgcgacct
1141 cctaccacca cagctacgag gacactggcc tcctttgcat ccatgccagc gccgacccaa
1201 gacaggttcg agaaatggta gaaatcatca caaaggagtt tattttaatg ggcggaaccg
1261 tggacacggt ggagctggaa cgagccaaga cgcagctgac atcaatgctc atgatgaacc
1321 tggaatccag gcctgtgatc ttcgaggatg tggggaggca ggtgctggcc actcgctcca
1381 gaaagctgcc gcacgagctg tgcacgctca tccgcaacgt gaagccggaa gatgtgaaga
1441 gagtcgcttc taagatgctc cgagggaagc cggcagtggc cgccctgggt gacctgactg
1501 acctgcccac gtatgagcac atccagaccg ccctgtcgag taaggacggg cgcctgccca
1561 ggacgtaccg gctcttccgg tagaaccgct ccccggcctg acagacccag ggagctgcag
1621 ctggagcccg ttcccgtgcg tgttagtttg gacacgaatt tagtctaaaa agctgtctgg
1681 ttgtataaac ggtgcaaaca atgtcgccac agcacccacg cggtttgcat tcttttggaa
1741 ctcaatgtgc cgatcagtgg agtcagtatc gagcctgacc accgcaagcc aggaagcagg
1801 tgaagtgccc agcgctggag tgcagcgtgc cacgaggagg gcggtcggtg cttccctcct
1861 cgggctgtgg gcacatgggg ccccgcaggt tccttggagg agccctgagc tgggaggcag
1921 caaaggctga cctatcaaag cctcccggag gccaccgtgc tgggtaccag gactcacctc
1981 tgacaagcag gagaaggtaa gggcccggtc agctccaagg agcgcgctcc acgcgcgtgc
2041 acacagcttc cctggtaata aagagctggc atctttctta aaaaaaaaaa aaaaaaa
//