LOCUS BC033071 1137 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens growth hormone regulated TBC protein 1, mRNA (cDNA
clone IMAGE:3641318), partial cds.
ACCESSION BC033071
VERSION BC033071.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1137)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1137)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC033071.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376022.
FEATURES Location/Qualifiers
source 1..1137
/db_xref="H-InvDB:HIT000041783"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3641318"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1137
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
CDS <1..832
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/codon_start=2
/product="GRTP1 protein"
/protein_id="AAH33071.2"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
/translation="VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERN
PRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAG
YLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALME
RLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELIL
EATTVPDICDKFKQITKGSFVMECHTFMQKIFSEPGSLSMATVAKLRESCRARLLAQG
"
BASE COUNT 288 a 265 c 301 g 283 t
ORIGIN
1 agtgaagcgc tatgtccgga aaggggtccc gctggagcac cgtgcccgcg tctggatggt
61 gctgagtggg gcccaggcgc agatggacca gaatcccggc tactaccacc agcttctcca
121 gggagagaga aaccccaggc tggaggacgc catcaggaca gacctgaacc ggaccttccc
181 cgacaacgtg aagttccgga agaccacgga cccctgctta cagaggaccc tgtacaatgt
241 gctgctggca tatgggcacc ataaccaggg agtgggctac tgccagggaa tgaattttat
301 agcaggatat ctgattctta taacaaataa tgaagaagaa tctttttggc tgttagatgc
361 tcttgttgga agaatactac cagattacta cagcccggcc atgctgggcc tgaagaccga
421 ccaggaggtc ctcggggagc tggtgcgggc gaagctgccg gctgtggggg ccctgatgga
481 gcgtctcggt gtgctgtgga cgctgctggt gtcccgctgg ttcatctgcc tgtttgtgga
541 catcttgccc gtggagacag tgcttcggat ctgggactgt ttgtttaacg aaggctcgaa
601 gattatcttc cgggtggccc tgaccttaat taagcagcac caggagttga ttttggaagc
661 caccaccgtt ccagacattt gcgataagtt taagcagata accaaaggga gtttcgtgat
721 ggagtgtcac acgtttatgc agaaaatatt ttcagaacct ggaagcttat ccatggccac
781 cgtcgccaag ctccgcgaga gctgcagggc ccggctgctg gcacaggggt gagcgtgcct
841 gtcccctgcg ttgctcgtct ctacactgac gatgcccctt tccagagttg acactggacc
901 aactttcact gctttccttt ttagtgttgt aaatacttga catcactaca ctttagttgt
961 gaatttttta aaagagcagt ttaaaatcag gtcattctac cagcttttga tgattagcta
1021 tgaagtcata ctttttaaag aaaacttatt tttacctgag agatcaataa tatataaaat
1081 gtgagtgtgg gtttgtatct aataaagtat gccaacacca aaaaaaaaaa aaaaaaa
//