LOCUS BC032925 1343 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus V-set domain containing T cell activation inhibitor 1,
mRNA (cDNA clone MGC:41287 IMAGE:1477676), complete cds.
ACCESSION BC032925
VERSION BC032925.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1343)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1343)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Marcelo Bento Soares, Ph.D.
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 67 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341500.
FEATURES Location/Qualifiers
source 1..1343
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:41287 IMAGE:1477676"
/tissue_type="Uterus, pregnant mouse"
/clone_lib="Soares_NMPu"
/lab_host="DH10B"
/note="Vector: pT7T3-Pac"
gene 1..1343
/gene="Vtcn1"
/gene_synonym="B7-H4"
/gene_synonym="B7h4"
/gene_synonym="B7S1"
/gene_synonym="B7x"
/gene_synonym="MGC41287"
/db_xref="GeneID:242122"
/db_xref="MGI:MGI:3039619"
CDS 51..902
/gene="Vtcn1"
/gene_synonym="B7-H4"
/gene_synonym="B7h4"
/gene_synonym="B7S1"
/gene_synonym="B7x"
/gene_synonym="MGC41287"
/codon_start=1
/product="V-set domain containing T cell activation
inhibitor 1"
/protein_id="AAH32925.1"
/db_xref="GeneID:242122"
/db_xref="MGI:MGI:3039619"
/translation="MASLGQIIFWSIINIIIILAGAIALIIGFGISGKHFITVTTFTS
AGNIGEDGTLSCTFEPDIKLNGIVIQWLKEGIKGLVHEFKEGKDDLSQQHEMFRGRTA
VFADQVVVGNASLRLKNVQLTDAGTYTCYIRSSKGKGNANLEYKTGAFSMPEINVDYN
ASSESLRCEAPRWFPQPTVAWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT
INNTYSCMIENDIAKATGDIKVTDSEVKRRSQLQLLNSGPSPCVSSSAFVAGWALLSL
SCCLMLR"
BASE COUNT 386 a 330 c 314 g 313 t
ORIGIN
1 caaaatctgg ccccacacac agcaggactg tgggaaggaa ctccctctcc atggcttcct
61 tggggcagat catcttttgg agtattatta acatcatcat catcctggct ggggccatcg
121 cactcatcat tggctttggc atttcaggca agcacttcat cacggtcacg accttcacct
181 cagctggaaa cattggagag gacgggaccc tgagctgcac ttttgaacct gacatcaaac
241 tcaacggcat cgtcatccag tggctgaaag aaggcatcaa aggtttggtc cacgagttca
301 aagaaggcaa agacgacctc tcacagcagc atgagatgtt cagaggccgc acagcagtgt
361 ttgctgatca ggtggtagtt ggcaatgctt ccctgagact gaaaaacgtg cagctcacgg
421 atgctggcac ctacacatgt tacatccgct cctcaaaagg caaggggaat gcaaaccttg
481 agtataagac cggagccttc agtatgccag agataaatgt ggactataat gccagttcag
541 agagtttacg ctgcgaggct cctcggtggt tcccccagcc cacagtggcc tgggcatctc
601 aagttgacca aggagccaac ttctcagaag tctccaacac cagctttgag ttgaactctg
661 agaatgtgac catgaaggtc gtatctgtgc tctacaatgt cacaatcaac aacacatact
721 cctgtatgat tgaaaacgac attgccaaag ccaccgggga catcaaagtg acagattcag
781 aggtcaaaag gcggagtcag ctgcagttgc tgaactctgg gccttccccg tgtgtttctt
841 cttctgcctt tgtggctggc tgggcactcc tatctctctc ctgttgcctg atgctaagat
901 gaggggccct ggctacacaa aagcatgcaa cgttgctggt ccaacagaat cccggagaac
961 tacagaaata ttttcctcaa gacatgacct agttttatat ttctagaaga agatgaaatc
1021 atgtctagaa gtctggagag agcagacagg aacaagatgt ggaaggaaaa caaaagtaac
1081 ccacagacac ccccgatcgg aacaagatgg acctagaaaa taattcaacc aaactagagt
1141 atactaagtg tgctgttaca atgtgtgtag ggtaggtgtc ctcccacatc tcaggggcct
1201 cccctggtcc accagctcct gagttaggat gggctgttat gatgtcactc tgaaggttcc
1261 tggatggttc ctactgccat atactcattt tatattcagc acattaaacc atagtgaatg
1321 ctaaaaaaaa aaaaaaaaaa aaa
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