LOCUS BC031650 1026 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens SH3 domain containing ring finger 2, mRNA (cDNA clone
IMAGE:5169239), partial cds.
ACCESSION BC031650
VERSION BC031650.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1026)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC031650.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: b Column: 2.
FEATURES Location/Qualifiers
source 1..1026
/db_xref="H-InvDB:HIT000041351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5169239"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1026
/gene="SH3RF2"
/gene_synonym="FLJ23654"
/gene_synonym="RNF158"
/db_xref="GeneID:153769"
CDS <1..886
/gene="SH3RF2"
/gene_synonym="FLJ23654"
/gene_synonym="RNF158"
/codon_start=2
/product="SH3RF2 protein"
/protein_id="AAH31650.2"
/db_xref="GeneID:153769"
/translation="KTSSFPDSRSPGLYTTWTLSTSSVSSQGSISEGDPRQSRPFKSV
FVPTAIVNPVRSTAGPGTLGQGSLRKGRSSMRKSKWWQRDGSLQRPLQSGIPTLVVGS
LRRSPTMVLRPQQFQFYQPQGIPSSPSAVVVEMGSKPALTGEPALTCISRGSEARIHS
AASSLIMEDKEIPIKSEPLPKPPASAPPSILVKPENSRNGIEKQVKTVRFQNYSPPPT
KHYTSHPTSGKPEQPATLKASQPEAASLGPEMTVLFAHRSGCHSGQQTDLRRKSALAK
ATTLVSTASGTQTVFPSK"
BASE COUNT 306 a 325 c 224 g 171 t
ORIGIN
1 aaagacctct agttttccag actcccggag ccctggtctc tacaccacat ggacgttatc
61 cacctcctct gtgtcctccc aaggcagcat ttcagaaggt gatccacggc aaagccgtcc
121 cttcaaatcc gtctttgtgc ccactgccat agtcaacccc gtgagaagca cagccggccc
181 tgggacttta ggacaagggt ctcttcggaa agggcggagc agcatgagaa agagtaagtg
241 gtggcagaga gatggatccc tgcagagacc cctccagtcc gggatcccca ctctcgtggt
301 aggctccctc agacgcagcc ccaccatggt ccttcggcct cagcagttcc aattctacca
361 gccacagggg atcccctcct ccccctcagc cgtggtggtg gagatggggt ccaagcctgc
421 cctcacgggg gagcccgccc tcacgtgcat cagcaggggc agtgaggccc ggatccactc
481 cgcggccagc tccctcatta tggaagacaa agaaatcccc atcaagagtg agcctctgcc
541 aaaaccgccc gcatctgccc caccatccat cctggtgaaa ccagaaaact caagaaatgg
601 catcgaaaag caagtcaaaa ccgtgagatt tcagaattac agccctcctc ccaccaaaca
661 ttacacctcc catcccacct ccggaaagcc tgaacagcca gccaccctca aggcgtccca
721 gcctgaagca gcgtccttgg gcccagagat gaccgtccta tttgcccacc gaagtggctg
781 ccactccgga cagcagacag acctccggag aaagtcagct cttgccaagg ccacaaccct
841 ggtgtccact gcctcaggca cgcagaccgt gtttcccagc aaatgaacct acgggtggct
901 tttcctagac cccaaagagg tgaattgcat ttaaatacag tctgcctcca aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaa
//