LOCUS BC031246 2388 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens PCI domain containing 2, mRNA (cDNA clone MGC:39643
IMAGE:5266649), complete cds.
ACCESSION BC031246
VERSION BC031246.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2388)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2388)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: f Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2388
/db_xref="H-InvDB:HIT000092319"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39643 IMAGE:5266649"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2388
/gene="PCID2"
/gene_synonym="F10"
/gene_synonym="FLJ11305"
/gene_synonym="RP11-98F14.6"
/db_xref="GeneID:55795"
/db_xref="HGNC:HGNC:25653"
CDS 598..1791
/gene="PCID2"
/gene_synonym="F10"
/gene_synonym="FLJ11305"
/gene_synonym="RP11-98F14.6"
/codon_start=1
/product="PCID2 protein"
/protein_id="AAH31246.1"
/db_xref="GeneID:55795"
/db_xref="HGNC:HGNC:25653"
/translation="MRLTDVVQQLVYEAIDSRDGASCAELVSFKHPHVANPRLQMASP
EEKCQQVLEPPYDEMFAAHLRCTYAVGDHDFIEAYKCQTVIVQSFLRAFQAHKEENWA
LPVMYAVALDLRVFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIED
SKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKA
MFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQ
FAEVTRAVSEGNLLLLHEALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTH
QLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPP
LSTVC"
BASE COUNT 558 a 574 c 630 g 626 t
ORIGIN
1 ggtcggcggc gctcccatgg cgcacattac cattaactag tacctgcagc aggtgggtcc
61 tagccgggga gcgcgcggcg gcgtggttgg ccctcggcgt gttccgtgtg tcccctcctg
121 ccttggaccc tcaggccttt tcctttcccg cctcgccacc ctttttccgt tcgggtcccc
181 ggcgggcagc cgcgcgagcc gaacagcggc ggccgggact cgggaaggcg gcccgagttc
241 tcccctgcag ggccgccgtg ggggccgggc ggtgtccgtg gatcgcggag tcgtcgcggt
301 gtaagtagac gcggcggtcc caggtcgctg ccctcacttg ctggcacgtg tggccgcgct
361 cccaggcggt ccgaagggcc tgcgggccac gccgagggcc cgctgtgggc ggtgctgtgt
421 cggatggacg ctgtttccca gcaggatgcg ggatgaattc ggggactcca ggaggcgatg
481 gaggagtaag cgcgagactg tggccgtgct gcaggccggg ctcgtgcccc tcgtcctcgc
541 tgtcgtttaa cgcccttcac tctccgagca caatgcacac ttcatatcgc tcggtacatg
601 cgtctgacag atgttgttca acagcttgtg tacgaagcca tcgacagcag agatggagca
661 tcttgtgcag agttggtgtc ttttaaacat cctcatgttg caaacccacg acttcaaatg
721 gcctctccag aggagaagtg tcaacaagtc ttggaacccc cttatgatga aatgtttgca
781 gctcatttaa ggtgcactta tgcagtgggg gatcatgact tcatagaggc atacaagtgc
841 cagaccgtga tagtccaatc attcttgcga gcattccagg cccacaaaga agaaaactgg
901 gctctgcctg tcatgtatgc agtagcgctt gaccttcgag tgtttgccaa taatgcagat
961 caacagttgg taaagaaagg aaaaagcaaa gttggggaca tgttggaaaa agcagcagag
1021 ttactgatga gctgtttccg ggtctgtgcc agcgacaccc gtgctggtat agaggactct
1081 aagaagtggg gcatgctgtt tctggtgaac cagctgttta aaatctactt caagatcaac
1141 aaactccatt tatgtaaacc cctaattaga gcaattgaca gctcaaacct gaaagacgat
1201 tacagcactg cacagagagt aacatacaaa tactacgttg gacgcaaggc tatgtttgac
1261 agcgatttta agcaagctga ggagtacctg tcatttgcct ttgagcattg tcaccgttct
1321 agtcagaaga acaaaaggat gattctgatc tatttgcttc cagtaaaaat gctattgggt
1381 cacatgccca ctgtggagct cctgaaaaag tatcacctga tgcagtttgc ggaagtaacc
1441 agagctgtga gcgagggcaa cctgctgctg ctgcacgagg cgctggcgaa gcacgaggcc
1501 ttcttcattc gctgcggaat cttcctcatc ctggagaagc tgaagatcat cacctacagg
1561 aacctcttta agaaagtgta tttgttactg aaaacacacc agctgtctct ggatgctttt
1621 ctggttgcct tgaagttcat gcaggtggag gacgtggaca ttgacgaagt tcagtgtatt
1681 ctggctaact tgatatacat gggacacgtc aaaggctaca tatcgcatca gcatcagaag
1741 ctggtggtca gcaagcagaa cccatttcct cccctgtcca cggtgtgttg aaagtacacg
1801 gagccccgag gacgggtgag cagttgtttc tttccacttt ggttgtgctg atgagaccgg
1861 tccggtactg caacaaggct ccctgaagcc ggaactcttg gaggcgcttt tcccagggat
1921 gctgaggctg agattttcag cacacccgag ttaatctcct tcatttgtaa ctaatttcag
1981 cctgatgaaa acctggaatt cctttttcac agactcggct ggttctggag tctttgtgag
2041 acttctttga aggaggcttt gcgtgaaggc tgctcggctc acttttccta agtgtggttc
2101 ctgaaggctg tctttgtaac tttttgtagt tctttgtgta aaaagcgtat tctgaattta
2161 tacacatggc atgttcttca ttatatcttc caggatacat ctatttttat atattaaatt
2221 tgaatgtgtt atcaaaatgc ttggttaact taaggcacct ttttaaaagc agaatttaat
2281 ttgatttaaa ttttccagat tttatagctt gcctgtatgg atgctcctca atttatgatg
2341 gggttacatc ccaataaact tattttattt gcaaaaaaaa aaaaaaaa
//