LOCUS BC029868 1964 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens sorting nexin 25, mRNA (cDNA clone MGC:34107
IMAGE:5171892), complete cds.
ACCESSION BC029868
VERSION BC029868.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1964)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1964)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: g Column: 14.
FEATURES Location/Qualifiers
source 1..1964
/db_xref="H-InvDB:HIT000040903"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34107 IMAGE:5171892"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1964
/gene="SNX25"
/gene_synonym="FLJ23161"
/gene_synonym="MSTP043"
/gene_synonym="SBBI31"
/db_xref="GeneID:83891"
/db_xref="HGNC:HGNC:21883"
CDS 222..1892
/gene="SNX25"
/gene_synonym="FLJ23161"
/gene_synonym="MSTP043"
/gene_synonym="SBBI31"
/codon_start=1
/product="SNX25 protein"
/protein_id="AAH29868.2"
/db_xref="GeneID:83891"
/db_xref="HGNC:HGNC:21883"
/translation="MKADLLRARNMKRYINQLTVAKKQCEKRIRILGGPAYDQQEDGA
LDEGEGPQSQKILQFEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEI
PQLVGEIYQNFFVESKEISVEKSLYKEIQQCLVGNKGIEVFYKIQEDVYETLKDRYYP
SFIVSDLYEKLLIKEEEKHASQMISNKDEMGPRDEAGEEAVDDGTNQINEQASFAVNK
LRELNEKLEYKRQALNSIQNAPKPDKKIVSKLKDEIILIEKERTDLQLHMARTDWWCE
NLGMWKASITSGEVTEENGEQLPCYFVMVSLQEVGGVETKNWTVPRRLSEFQNLHRKL
SECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNKFLQEETEEDSDLSDYGDDVDG
RKDALAEPCFMLIGEIFELRGMFKWVRRTLIALVQVTFGRTINKQIRDTVSWIFSEQM
LVYYINIFRDAFWPNGKLAPPTTIRSKEQSQETKQRAQQKLLENIPDMLQSLVGQQNA
RHGIIKIFNALQETRANKHLLYALMELLLIELCPELRVHLDQLKAGQV"
BASE COUNT 687 a 344 c 462 g 471 t
ORIGIN
1 gaaaaaatgc catgtagcag attgggagaa attacctgat tgttaactct ctgaaacctt
61 aaggggttaa ccgctgtctc gctccattcc tgctgctatg acaaaatacc acaaactggg
121 tatttactat aaagaagaga aatttatttc ttacttatct ggagtttggg aatccaggat
181 caagcctgcg gcattcagtg gctggtaaag aaactgcggc aatgaaagct gatctcctga
241 gggccaggaa catgaagagg tacatcaacc aactgactgt ggcaaagaag cagtgtgaga
301 agagaatccg aatcctggga ggccctgcct atgaccagca agaggatggg gccctggatg
361 agggggaagg gcctcaaagc cagaagattc ttcagtttga agatatcttg gccaatacgt
421 tctaccgaga gcactttgga atgtacatgg aaaggatgga caaaagagct ctgattagtt
481 tttgggaatc tgtggaacat ttaaagaatg ctaacaagaa tgaaattcca caattagttg
541 gtgaaattta tcagaatttc tttgtggaga gcaaagaaat atctgtggaa aaatcacttt
601 acaaagaaat tcagcagtgt cttgtaggaa ataaaggtat tgaagtattc tacaaaatcc
661 aggaagatgt ttatgagacc ctaaaggaca ggtattaccc ttcatttatt gtcagtgacc
721 tgtatgagaa attgttgata aaagaggaag aaaaacatgc ctcacagatg atttccaaca
781 aggatgagat gggcccaaga gatgaggctg gtgaggaagc cgtggatgat ggtaccaatc
841 agatcaatga acaagccagt tttgctgtaa acaaactgcg agaactaaat gagaaacttg
901 aatataaaag gcaagctcta aattctattc aaaatgcacc aaaacctgac aagaagattg
961 tttccaagtt gaaggatgaa ataatcctaa tagagaaaga acgcacagac cttcagctgc
1021 acatggcaag aacggattgg tggtgtgaaa accttggcat gtggaaagcc tccatcacca
1081 gtggagaggt tacagaagag aatggtgagc aattgccatg ttactttgtc atggtaagcc
1141 tacaagaagt tggaggagtt gaaactaaga actggacggt ccccagaagg ctcagcgagt
1201 ttcagaattt acaccggaaa ctcagtgagt gcgtcccttc tttaaaaaaa gtccagttgc
1261 cttctcttag caagctgcct ttcaaatcta tagatcaaaa gtttatggaa aagtcgaaga
1321 atcaattaaa taagttttta caggaggaga cagaggagga cagtgacctg tcagattatg
1381 gtgatgatgt ggatgggagg aaagacgcct tggctgaacc atgtttcatg ttgattgggg
1441 agatttttga acttcgagga atgtttaaat gggtgagaag aacattaatt gccctcgttc
1501 aggtcacttt tggaagaacc atcaacaaac aaatccggga cacagtcagc tggattttca
1561 gtgagcaaat gttggtttac tacatcaata ttttccggga tgctttttgg ccaaatggga
1621 agttggcacc accgaccaca atcagaagca aagagcaaag tcaggaaaca aaacagagag
1681 cacagcaaaa gctgcttgaa aacattccag atatgcttca gagccttgtt ggacagcaaa
1741 atgcccgcca cggtataata aaaatattca atgcactgca agaaacaaga gccaacaagc
1801 atctgttata tgcgctgatg gaactgctgc taattgaact gtgtcctgag ctgagagttc
1861 atttagatca acttaaagct ggccaagttt gagactacac aaataaacca ccagaaaaat
1921 gtctgtgtaa taatagaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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