LOCUS BC029828 1976 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 1, mRNA
(cDNA clone MGC:34476 IMAGE:5176204), complete cds.
ACCESSION BC029828
VERSION BC029828.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1976)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1976)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: m Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4809289.
FEATURES Location/Qualifiers
source 1..1976
/db_xref="H-InvDB:HIT000040891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34476 IMAGE:5176204"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1976
/gene="B4GALNT1"
/gene_synonym="GALNACT"
/db_xref="GeneID:2583"
/db_xref="HGNC:HGNC:4117"
/db_xref="IMGT/GENE-DB:4117"
/db_xref="MIM:601873"
CDS 433..1419
/gene="B4GALNT1"
/gene_synonym="GALNACT"
/codon_start=1
/product="B4GALNT1 protein"
/protein_id="AAH29828.1"
/db_xref="GeneID:2583"
/db_xref="HGNC:HGNC:4117"
/db_xref="IMGT/GENE-DB:4117"
/db_xref="MIM:601873"
/translation="MWLGRRALCALVLLLACASLGLLYASTRDAPGLRLPLAPWAPPQ
SPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCESSGGGLPLPFQKQVRAIDL
TKAFDPAELRAASATREQEFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSI
LVPGLSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLDQLNR
QLQLVTYSSRSYQTNTADTGARPGWRDGQAGQTEKNQKGWSGQMAEGMGGIWAMARAV
QPHNGCFNWTSRARGRKGAFVHLGLEQARGKPEPWVCLPFRPTVGGPRKRLV"
BASE COUNT 417 a 592 c 551 g 416 t
ORIGIN
1 cgcattcccc gcgcggagcc gaagcagccg caacgagccg ggagctgagc cgcgctgcgc
61 tgcggtgcga agagccgggc ggcggccaga gccctccccg cgctgccagt gggacgcgga
121 gccagggatc cccggctttg ccccggggct ggggtgcaac agactcttaa cttggtcctc
181 gcgccccgcc aaccgccccc gggcaggaaa cgcccagaac caccaccgcg ccgcgctcca
241 caaaagcccc gggagttcca agacgggagg gatcgggcgc gctccagagg caggagggtc
301 ccccacaccc tcaggctcat gcccagctcc cccatcgggc agcccccagc cccatgagga
361 ccctcaggcc ggggcgagag cccggcacag cccggaccga aattttgccg ctgccttaga
421 gcgttagaca ggatgtggct gggccgccgg gccctgtgcg ctctggtcct tctgctcgcc
481 tgcgcctcgc tggggctcct gtacgcgagc acccgggacg cgcccggcct ccggctacct
541 cttgcgccgt gggcgccccc gcaaagcccc cgcaggcccg agctgccaga tcttgctcct
601 gagccccgct acgcacacat cccggtcagg atcaaggagc aagtagtggg gctgctggct
661 tggaacaact gcagttgtga gtccagtggg gggggcctcc ccctcccctt ccagaaacaa
721 gtccgggcta ttgacctcac caaggccttt gaccctgcag agctgagggc tgcctctgcc
781 acaagagagc aggagttcca ggcctttctg tcgaggagcc agtccccagc tgaccagctg
841 ctcatagccc ctgccaactc cccgctccag taccccctac agggtgtgga agttcagccc
901 ctcaggagca tcttggtgcc agggctgagc cttcaggcag cttctggtca ggaggtatac
961 caggtgaacc tgactgcctc cctaggcacc tgggacgtgg caggggaagt gactggagtt
1021 actctcactg gagagggtca ggcagatctc acccttgtca gcccagggct ggaccaactc
1081 aacaggcaac tacaactggt cacttacagc agccgaagct accagaccaa cacagcagac
1141 acaggtgcaa ggcctgggtg gagagacggg caggctgggc aaacagagaa gaaccagaaa
1201 ggctggagtg ggcaaatggc agagggcatg ggaggcatct gggctatggc cagagctgtc
1261 cagccacaca atgggtgctt caactggacc agcagggcca gagggagaaa gggggccttt
1321 gttcatctgg ggctggagca ggccagaggg aaacccgagc cttgggtgtg tctccccttt
1381 aggccaactg tggggggccc caggaagaga cttgtctaag gagttagaag actatattcc
1441 caacccaccc cttactagag ggcaaaggtc tttactttcc tgagatccca tttctcttcc
1501 agcaaaagag gcctaaaagc cctctttgct tctccccaaa gctggtttgt tgcactaagt
1561 ttgcttccac cttagggcct ttgcactttc tattttctca gcctggaatg ctcttcccca
1621 gatttttgca gactggcttc ttcttgtcat ttagatctca gttcaaatgc ctcctcttca
1681 ctatcacatt acttgtttgt cttattttcc actcaatact taccagtatc tgaatttttt
1741 aatttactta gcctggcacc agactgacta ggttgctatc agttttgttg cttaatagtt
1801 gtgtaaatgt ggcaagttac ttttctgtgt ctcagctttt ttttctgttg taggaatcta
1861 cttaataggg ctatcatggg gataaaatga gtgcatatat ttaaggtaat tttttaacgg
1921 gtctggcaca tagtaagtgc tcaataaaga ttagctttta cttaaaaaaa aaaaaa
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