LOCUS BC029268 1818 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ATG10 autophagy related 10 homolog (S. cerevisiae), mRNA (cDNA clone MGC:34134 IMAGE:4521833), complete cds. ACCESSION BC029268 VERSION BC029268.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 52 Row: c Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33589825. FEATURES Location/Qualifiers source 1..1818 /db_xref="H-InvDB:HIT000040717" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34134 IMAGE:4521833" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1818 /gene="ATG10" /gene_synonym="DKFZP586I0418" /gene_synonym="FLJ13954" /gene_synonym="pp12616" /db_xref="GeneID:83734" /db_xref="HGNC:HGNC:20315" CDS 265..927 /gene="ATG10" /gene_synonym="DKFZP586I0418" /gene_synonym="FLJ13954" /gene_synonym="pp12616" /codon_start=1 /product="ATG10 autophagy related 10 homolog (S. cerevisiae)" /protein_id="AAH29268.1" /db_xref="GeneID:83734" /db_xref="HGNC:HGNC:20315" /translation="MEEDEFIGEKTFQRYCAEFIKHSQQIGDSWEWRPSKDCSDGYMC KIHFQIKNGSVMSHLGASTHGQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLY SCSYQVPVLYFRASFLDGRPLTLKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPF FVLHPCKTNEFMTPVLKNSQKINKNVNYITSWLSIVGPVVGLNLPLSYAKATSQDERN VP" BASE COUNT 507 a 383 c 451 g 477 t ORIGIN 1 acctgactga aggaggccgc ggacctgact gaaggaggcc acggccactt ctggttggcc 61 tcggggcgcg ctggctcggc tcttcctccg ccctcgaggc ccccgcagtc ccatcattca 121 gttccgtagg gtcaccggcg cggcagtggc ctcgcagggc gctgggtccc tctccccagc 181 tctcctcccc ctggccgcgt cgccccgccc tcgccgggct gggctgcggg gtcaggggcc 241 gagcggagag ggttatcatt taacatggaa gaagatgagt tcattggaga aaaaacattc 301 caacgttatt gtgcagaatt cattaaacat tcacaacaga taggtgatag ttgggaatgg 361 agaccatcaa aggactgttc tgatggctac atgtgcaaaa tacactttca aattaagaat 421 gggtctgtga tgtcacatct aggagcatct acccatggac agacatgtct tcccatggag 481 gaggctttcg agctaccctt ggatgattgt gaagtgattg aaactgcagc agcgtccgaa 541 gtgattaaat atgagtatca tgtcttatat tcctgtagct accaagtgcc tgtactttac 601 tttagggcaa gctttttaga tgggagacct ttaactctga aggacatatg ggaaggagtt 661 catgagtgct ataagatgcg actgctacag ggaccatggg acactattac gcaacaggaa 721 catccaatac ttgggcaacc cttttttgta cttcatccct gcaagacgaa tgaattcatg 781 actcctgtat taaagaattc tcagaaaatc aataagaatg tcaactatat cacatcatgg 841 ctgagcattg tagggccagt tgttgggctg aatctacctc tgagttatgc caaagcaacg 901 tctcaggatg aacgaaatgt cccttaacaa gattcttcta ttgagtttag gaattgcggc 961 acgaagaatg ccaagagttt acctggccag ccctggcttt aataggactg ataccatgga 1021 atatttcatc tcaccaagat gtgacatgga ttatttttcc cttggacaca aatgtctaca 1081 gcaactggtg tttgataggc tgaatgttta gaagaaacac ttcaaaggga tacatcatgg 1141 ccaggcatgg tggctcacac ctgtaatcca agcactttgg gaggccaagg tgggagcatc 1201 acttgatcct gggagttcga gaccagcctg ggcaacatgg tgaaaccctg tcggtacaaa 1261 aaaatacaaa aatttgcctg tttatggtgg tgtgttcctg tagtcccagc tccccaggag 1321 gctgaggtgg gaggttggct ttaacccagg aggcagaggt tgcagtgagc tgagactgtg 1381 ccactgcagt ccagcctggg tgacagagcc agacactgtc tcgggaaaaa aaaaaaaaaa 1441 gacacatcac tataaatagc aaaaaaacaa atctaactta ttaatactag gaataccaac 1501 attattaggg cacttgcagg ttattctttt ctaggccaag tacttcactt ccatttgtct 1561 gacatggaga ttgagggaga aatgtatttg tgtgttcatt ttaatgtaag atatataaaa 1621 attaaattac tggatttacc tgtccctgaa actggtgtta taaacatgac ctatcttaag 1681 tgattttccc acaatcaaac tcaggaacaa tagattattt ctgttttact ccaaaagaga 1741 gagagagagt gagtgtgagt gtgtgtgtgt gtgtgtgtgt atgtgtgggt gtttgtgtag 1801 atagttgtaa aaaaaaaa //