LOCUS BC028717 4562 bp mRNA linear HUM 22-AUG-2008
DEFINITION Homo sapiens cytohesin 3, mRNA (cDNA clone MGC:33020
IMAGE:4811560), complete cds.
ACCESSION BC028717
VERSION BC028717.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4562)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946275.
FEATURES Location/Qualifiers
source 1..4562
/db_xref="H-InvDB:HIT000040621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33020 IMAGE:4811560"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4562
/gene="CYTH3"
/gene_synonym="ARNO3"
/gene_synonym="GRP1"
/db_xref="GeneID:9265"
/db_xref="HGNC:HGNC:9504"
/db_xref="MIM:605081"
CDS 141..1340
/gene="CYTH3"
/gene_synonym="ARNO3"
/gene_synonym="GRP1"
/codon_start=1
/product="cytohesin 3"
/protein_id="AAH28717.1"
/db_xref="GeneID:9265"
/db_xref="HGNC:HGNC:9504"
/db_xref="MIM:605081"
/translation="MDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYE
IAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVA
QFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPG
EAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERF
IAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGG
RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSH
KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRK
RRIANKK"
BASE COUNT 1158 a 1161 c 1235 g 1008 t
ORIGIN
1 agcggaggag gcccggccgc gacccgggcc gcgcgctgag gagccgcccg gtcgcctgcg
61 cgctcactcc ggcggcgtcc ccagcccgcg gcccctctgc tgccggcccc cggctcgccg
121 gctgcgggag tggcctcaag atggatgaag acggcggcgg cgagggtggt ggcgtgcctg
181 aagacctctc attagaagag agagaagaac ttctagacat tcgtcgaaga aaaaaggaac
241 ttattgatga cattgagagg ctgaaatatg aaattgcaga ggtgatgaca gagatcgaca
301 atctaacttc cgtagaggag agcaaaacga ctcagaggaa caaacagata gccatgggaa
361 gaaagaaatt caacatggat cccaaaaagg gaattcagtt tctaatagaa aatgacctgc
421 tacagagttc cccagaagac gtcgcccagt tcctttataa aggagaaggc ctaaataaga
481 ccgtcattgg ggactacctg ggtgaaaggg atgaatttaa tattaaagtt cttcaagcct
541 ttgttgaact ccatgagttt gctgatctca accttgtaca agccttaagg cagttcttat
601 ggagcttcag gctgcccggg gaggcgcaga agattgatcg catgatggag gctttcgctt
661 ctcgctactg cctgtgcaac cccggggtct tccagtccac agacacgtgc tacgtgctgt
721 cattcgccat catcatgctc aacaccagcc tccacaacca caacgtgcgt gacaagccca
781 cggcagaacg gttcatcgcc atgaaccgcg gcatcaacga gggcggggac ctccctgagg
841 agctgctgag gaatttgtat gagagcatta agaacgagcc atttaagatc ccggaggacg
901 acgggaacga cctgacccac accttcttca accccgaccg cgagggctgg ctcctgaagc
961 tgggagggcg tgtgaagacc tggaagcgcc ggtggttcat cctgaccgat aactgcctct
1021 attactttga atacacaaca gataaggagc ccaggggaat catcccgttg gaaaacctca
1081 gcatcaggga ggtggaggac ccccggaaac ccaactgttt tgagctctac aatcccagcc
1141 acaaagggca ggtcatcaag gcctgtaaga cggaggccga cggccgcgtg gtagagggga
1201 accatgtggt gtaccggatc tcagccccga gcccggagga gaaggaggag tggatgaaat
1261 ccatcaaagc cagtatcagc agagatccct tctatgacat gttggcaacg aggaaacgaa
1321 ggattgccaa taaaaaatag ctttcctggc taaaagaccc aggtaaaaga cccaacccca
1381 gcagaaagac accgcgggcg gcccctccgc ggaaggcgtg gcagggaggc agtcgccctg
1441 cggtgcaagc tgctgctcca gagcataccg tggcccaggt ggtatcccca aggcctcgtg
1501 ccgtggctgg ggtcctggga ggtggtcgcc ctgcagtgca agctgctgct ccagagcgta
1561 ccgtggccca gactgatcct cgaggcctcc tgccgtggct ggggtcatgg tcggctgcgc
1621 atgtccagaa gcatttcctt cctgcgacca tcccggcgcc cctaggggga gaagccagga
1681 cagcagcttc cgctgtctcc acagcagaca cgggacggat tccacagacg ggagcctcat
1741 tcgtaccatg ccaaacgcat tcactcgggg cagtattaac cgttctagaa agccactgtt
1801 ttatagcaaa acaggaaagg aaaagctacc agttttttat tcagaatttt tctcagatat
1861 ataggattat agcttttata tgccttttta tattctgaaa ttataacaaa agatactttc
1921 taacagtagt atttttagaa tggcagctat aaagttaact cctggacaca agtatatact
1981 gtgcactgaa aaaatatcca tctacacagc acccaagggg agggctgggg gcaccggcac
2041 gggggcagcg tgcagccctg ccctgtcagg ctgtcagaca agccccgggg ggcagcaggt
2101 gggctcggga cgggctgggg gagggacggc catggcactt gggggctcca gggtgactcc
2161 catgaggcct cccttcaacc aggctttttg gccccacaaa tactttaagc aaatcattaa
2221 aattataaca gttaatggtt tgggggtgtt taggctgtaa ctgctaactc ctaggaaaca
2281 gccttttccc tggacacaga tggtccatac gctgagccac gtgaaactgc tgatgttttg
2341 tttagatgca cacacatggc agcgtttcat acaggtcagc aggttagacc ggcttttgac
2401 catattcatc gctatttaaa acctgtggca aaatgaacgc ttattttaca gactttctaa
2461 tttgaccaga tttcttaatg aatagacaca gaattaacta aaaacagtct caccccatgt
2521 agtgcgccgt gtcctgagag aggtgccctc cctacgagga gggaagaaca ggccctgggg
2581 tgcagaggcc cggcacgtag agaacccaga tagacgccgg tggtggaact ggtcaaactc
2641 cacgcccgcc tgggaggttg tcaggttgct gtggatgtaa ggataggagg tgcccagtgc
2701 tccgctcaag gaaggctgga tctgggcccc acctacagag agggctcagg gctggaccgg
2761 gggcattgtg tgcttgggcc gacccgggcc ggtggcagac gctgttctct gtcgggagat
2821 ttgcgtcccc aggaccctgt tacacagtgg gctgttgggt tggtggctgg cttttcctct
2881 atggacttcc tcttcctgcc ccacctgcat aggcacacac accttgaatc tgcaccctct
2941 ggagggcatc tgtactcctg tgcaaaatgc ccagtccaga gacaaaacct cagactttgt
3001 gcacctaggt ttccttctca gcagcggaga ctgttctttg agttgccttg aagtggaggc
3061 cgagcggctg cgggcccttc gcctccctgc ggctgacctt gatgtagctt taagtcacac
3121 tagactgcag aggggtccga ggccagaaac ccctgtcctg catcagactt tcattcccac
3181 gttcttaggc tttgttactg atacctcaaa tcggaagttt tagttctgag aaaggcaagt
3241 cagcgttctt gaaatgcctg actggtagat atgcaactct ggcctccagt cttccatgaa
3301 aataaatgct gcctggaccc ccacccagac cacacactga cggccggctc cggcggtgcc
3361 cacccctcag gctggcccgg cacccaagac tggccacagc cagctctgtc agcatgttgt
3421 gctcggacaa gctgtttcct tcttctgacc aacccaggtg tgacctgggg atgcagagct
3481 ttctgttttg ggtgttggga gaagcagcag gaaggagtcg ccagatgatc aagctccccc
3541 tttgctgtca tctgtgaatg agcttcgcca ggtggtgggc acctgggagc catgcagagg
3601 ctgtggtgct gagttagact ccaggtactt tgtggtcaaa ggaaatcgcc tagctccagg
3661 ctgtgttagg acagtattag catgaaggct gtgcgaccat catgcctgct gatccttgag
3721 gcaggcctgg tccagaaaac tctgggtcag tgactgcgca gggccagccg ctaccaggac
3781 ggccctgaaa caggacacat ctgttttttg tccctcaccc tgggcaggcc gcgtcacaat
3841 cacagtcctc ctcctcccca ccctgacgtc tgagcgcagg gcttgaattg ttagtcccaa
3901 ctctggccaa agatactttt ttccagagac agaggccagg aggcagtgag gggagccccg
3961 cggggaggcg gcggcgactg ccacagccct tccagcctgt cttgctggcc gccctggttc
4021 atatttgagt ttaattgtac tgaccctgga cccagataag cagcaacttt gtgtctttgg
4081 ggtcacagaa cattttgggg cagtttaatg tggtaccaaa ctgaaaatag gagctattta
4141 tagatggagc agcacttagt gcttcataga aagcaatgcc tatttttaaa gttacaaacg
4201 cagatatcta catagatatg ctttgctgag aagttaggtc tgtggtagac cagaaaccac
4261 aaattgactt tttttcttag aaaatatttc tatttgcggt aaatatagta atatgtaaat
4321 aatgtacatc tgttgatttc tggagtgtct gttattcaat gatgtatata ctcccacagc
4381 tcgcatgaag gaacagcctc tattgatact tggttgtaaa gtgaagtaag attggagggt
4441 ggatggctgt cagagctctt gcagatactg tgttcactaa ataaaaatca catgtattgt
4501 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaccaaa aaaaaaaaaa
4561 aa
//