LOCUS BC028705 1877 bp mRNA linear HUM 12-JAN-2007 DEFINITION Homo sapiens sphingomyelin synthase 2, mRNA (cDNA clone MGC:26963 IMAGE:4823252), complete cds. ACCESSION BC028705 VERSION BC028705.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1877) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1877) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: f Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059795. FEATURES Location/Qualifiers source 1..1877 /db_xref="H-InvDB:HIT000040614" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26963 IMAGE:4823252" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1877 /gene="MGC26963" /gene_synonym="SMS2" /db_xref="GeneID:166929" CDS 365..1462 /gene="MGC26963" /gene_synonym="SMS2" /codon_start=1 /product="MGC26963 protein" /protein_id="AAH28705.1" /db_xref="GeneID:166929" /translation="MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKS LSSGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHE RVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFC FIIGTLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSH ILCGDFLFSGHTVTLTLTYLFIKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTID VIIAYYITTRLFWWYHSMANEKNLKVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFS WPLSWPPGCFKSSCKKYSRVQKIGEDNEKST" BASE COUNT 577 a 371 c 384 g 545 t ORIGIN 1 gtcgagagcg gaaatggagt ttcaaaatca caagcttctt tcccacatga acataagact 61 aggagcacat atggaagagt aaagttgaag ggaatttgga tgatgatttg gcaagatgct 121 gtgggatagt aacatctttt tgagggaaga attggcttcc tttcttgaaa gtggtgaagg 181 tacagcatat agctgcatgg aagaaacagt aatcggatgg ctaccttcta cattttgtat 241 taggaaacaa agtccattgt aagagtccat gttgatcttg gaaatagaag gattgaaaaa 301 agctaaattt ccacaaagaa caagaacttg accatctcct ttttgatctg aagactaggg 361 gacaatggat atcatagaga cagcaaaact tgaagaacat ttggaaaatc aacccagtga 421 tcctacgaac acttatgcaa gacccgctga acctgttgaa gaagaaaaca aaaatggcaa 481 tggtaaaccc aagagcttat ccagtgggct gcgaaaaggc accaaaaagt acccggacta 541 tatccaaatt gctatgccca ctgaatcaag gaacaaattt ccactagagt ggtggaaaac 601 gggcattgcc ttcatatatg cagttttcaa cctcgtcttg acaaccgtca tgatcacagt 661 tgtacatgag agggtccctc ccaaggagct tagccctcca ctcccagaca agttttttga 721 ttacattgat agggtgaaat gggcattttc tgtatcagaa ataaatggga ttatattagt 781 tggattatgg atcacccagt ggctgtttct gagatacaag tcaatagtgg gacgcagatt 841 ctgttttatt attggaactt tatacctgta tcgctgcatt acaatgtatg ttactactct 901 acctgtgcct ggaatgcatt tccagtgtgc tccaaagctc aatggagact ctcaggcaaa 961 agttcaacgg attctacgat tgatttctgg tggtggattg tccataactg gatcacatat 1021 cttatgtgga gacttcctct tcagcggtca cacggttacg ctgacactga cttatttgtt 1081 catcaaagaa tattcgcctc gtcacttctg gtggtatcat ttaatctgct ggctgctgag 1141 tgctgccggg atcatctgca ttcttgtagc acacgaacac tacactatcg atgtgatcat 1201 tgcttattat atcacaacac gactgttttg gtggtaccat tcaatggcca atgaaaagaa 1261 cttgaaggtc tcttcacaga ctaatttctt atctcgagca tggtggttcc ccatctttta 1321 tttttttgag aaaaatgtac aaggctcaat tccttgctgc ttctcctggc cgctgtcttg 1381 gcctcctggc tgcttcaaat catcatgcaa aaagtattca cgggttcaga agattggtga 1441 agacaatgag aaatcgacct gaggagcaaa acaaaggcat cagctcttac accaaaagag 1501 ttaacgctgt aaccaaaggt atagttttgt tttttatttt aggagaactg actggtaaat 1561 gaagaaatgg accaaatttt gtgtaaacga ttagaaagat gaacaaagta ttgccctttg 1621 actggttttc ttcttcatcc tgagaaagat acattctctt gcagctcttc attcattggt 1681 gacaagcccc caccccggga ctttactaat gagcttgtta aagaggtgcc aaagaacata 1741 ttcctccttt ctttattctt tctccaccaa aaccctctac ttcagaattt tttcaggata 1801 tttttcagcc caaggtcaga agaatgtgtt aatattttaa ataaaatatc tggacatcta 1861 caaaaaaaaa aaaaaaa //