LOCUS BC028387 2405 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens WD repeat domain 20, mRNA (cDNA clone MGC:33177
IMAGE:4823662), complete cds.
ACCESSION BC028387
VERSION BC028387.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC028387.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317277.
FEATURES Location/Qualifiers
source 1..2405
/db_xref="H-InvDB:HIT000040548"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33177 IMAGE:4823662"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2405
/gene="WDR20"
/gene_synonym="DMR"
/gene_synonym="FLJ33659"
/gene_synonym="MGC33177"
/gene_synonym="MGC33183"
/db_xref="GeneID:91833"
/db_xref="HGNC:HGNC:19667"
CDS 32..1741
/gene="WDR20"
/gene_synonym="DMR"
/gene_synonym="FLJ33659"
/gene_synonym="MGC33177"
/gene_synonym="MGC33183"
/codon_start=1
/product="WD repeat domain 20"
/protein_id="AAH28387.1"
/db_xref="GeneID:91833"
/db_xref="HGNC:HGNC:19667"
/translation="MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQG
SNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPT
CHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVHG
SESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTV
GEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKY
IVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDF
QDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQ
PLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVM
DGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKT
LGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVS
FNP"
BASE COUNT 695 a 536 c 560 g 614 t
ORIGIN
1 acttagggca ggatgaacgc tgctttccaa gatggcgacg gagggaggag ggaaggagat
61 gaacgagatt aagacccaat tcaccacccg ggaaggtctg tacaagctgc tgccgcactc
121 ggagtacagc cggcccaacc gggtgccctt caactcgcag ggatccaacc ctgtccgcgt
181 ctccttcgta aacctcaacg accagtctgg caacggcgac cgcctctgct tcaatgtggg
241 ccgggagctg tacttctata tctacaaggg ggtccgcaag gctgctgact tgagtaaacc
301 aatagataaa aggatataca aaggaacaca gcctacttgt catgacttca accacctaac
361 agccacagca gaaagtgtct ctctcctagt gggcttttcc gcaggccaag tccagcttat
421 agacccaatc aaaaaagaaa ctagcaaact ttttaatgag gaaagactaa tagacaagtc
481 acgagttacc tgtgtcaaat gggttcacgg ttcggaaagc cttttcctag tagcccactc
541 gagtgggaac atgtacttat ataatgtgga gcacacttgt ggcaccacag ccccccacta
601 ccagcttctg aagcagggag agagctttgc cgtgcacact tgcaagagca aatccacgag
661 gaaccctctc cttaagtgga cggtgggcga gggggccctc aacgagtttg ctttctcccc
721 agatggcaag ttcttagcgt gcgtgagcca ggacgggttt ctgcgggtgt tcaactttga
781 ctcagtggag ctgcacggta cgatgaaaag ctactttggg ggcttgctgt gtgtgtgctg
841 gagcccggat ggcaagtaca tcgtgacagg tggggaggac gacttggtga cagtctggtc
901 ctttgtagac tgccgagtaa tagccagagg ccacgggcac aagtcctggg tcagtgttgt
961 agcgtttgac ccttatacca ctagtgtaga agaaggtgac cctatggagt ttagtggcag
1021 cgatgaggac ttccaagacc ttcttcattt tggcagagat cgagcaaata gtacacagtc
1081 caggctctcc aaacggaact ctacagacag ccgccccgta agtgtcacgt atcggtttgg
1141 ttccgtgggc caggacacac agctctgttt atgggacctt acagaagata tccttttccc
1201 tcaccaaccc ctctcaagag caaggacaca cacaaatgtc atgaatgcca cgagtcctcc
1261 tgctggaagc aatgggaaca gtgttacaac acccgggaac tctgtgccgc ctcctctgcc
1321 acggtccaac agccttccac attcagcagt ctcaaatgct ggcagcaaaa gcagtgtcat
1381 ggacggggcc attgcttctg gggtcagcaa atttgcaaca ctttcactac atgaccggaa
1441 ggagaggcac cacgagaaag atcacaagcg aaatcatagc atgggacaca tttctagcaa
1501 gagcagtgac aaactgaatc tagttaccaa aaccaaaacg gaccctgcta aaactctggg
1561 aacgcccctg tgtcctcgaa tggaagatgt tcccttgtta gagccgctga tatgtaaaaa
1621 gatagcacat gagagactga ctgtactaat atttcttgaa gactgtatag tcactgcttg
1681 tcaggaggga tttatttgca catggggaag gcctggtaaa gtggtaagtt ttaatcctta
1741 atgctgcacc agatctagaa cttgaatagg tagtgacttt tttctttttc gtgggagggg
1801 tggggtgtac aatgaatgtg aatgacactt cttattctta atgtaaatct caatgcatca
1861 gagccataat tttggatact gcatgccatg taattctgaa tcatttgata atttacctta
1921 gagcatttaa aaaaatataa tcaaactaat tgccagccaa gtcagtcatc ctcctgggag
1981 tatatagagt cccaaggtta gcgctcctgt attagactat ttcaatttta ggaaaatcat
2041 gaccatgtgg ggaaacaatg actttaaaat gctgaaatta aaatttatgc tttaactgga
2101 atattttttg cttaactact caattagaat attgtacacc tgatcaatgt gtgttcagca
2161 cagatggcca tgaattgtca tttatagtcc aattttttat cttaatcata aaatgtttag
2221 gaatctatga aatttaactt taggaacaaa acgtttagca gggttgattg atattatttt
2281 tacattgttc tggcaatcca cagaaagaga agagccttaa tttttaaaac ccattttagt
2341 cattttatga caattaaagt tgtttaataa acatcttttt tcaaagaagc aaaaaaaaaa
2401 aaaaa
//