LOCUS BC026216 4562 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 1 (glutamate/neutral amino acid
transporter), member 4, mRNA (cDNA clone MGC:21344 IMAGE:4420405),
complete cds.
ACCESSION BC026216
VERSION BC026216.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4562)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314631.
FEATURES Location/Qualifiers
source 1..4562
/db_xref="H-InvDB:HIT000040146"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21344 IMAGE:4420405"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4562
/gene="SLC1A4"
/gene_synonym="ASCT1"
/gene_synonym="SATT"
/db_xref="GeneID:6509"
/db_xref="HGNC:HGNC:10942"
/db_xref="MIM:600229"
CDS 185..1783
/gene="SLC1A4"
/gene_synonym="ASCT1"
/gene_synonym="SATT"
/codon_start=1
/product="solute carrier family 1 (glutamate/neutral amino
acid transporter), member 4"
/protein_id="AAH26216.1"
/db_xref="GeneID:6509"
/db_xref="HGNC:HGNC:10942"
/db_xref="MIM:600229"
/translation="MEKSNETNGYLDSAQAGPAAGPGAPGTAAGRARRCAGFLRRQAL
VLLTVSGVLAGAGLGAALRGLSLSRTQVTYLAFPGEMLLRMLRMIILPLVVCSLVSGA
ASLDASCLGRLGGIAVAYFGLTTLSASALAVALAFIIKPGSGAQTLQSSDLGLEDSGP
PPVPKETVDSFLDLARNLFPSNLVVAAFRTYATDYKVVTQNSSSGNVTHEKIPIGTEI
EGMNILGLVLFALVLGVALKKLGSEGEDLIRFFNSLNEATMVLVSWIMWYVPVGIMFL
VGSKIVEMKDIIVLVTSLGKYIFASILGHVIHGGIVLPLIYFVFTRKNPFRFLLGLLA
PFATAFATCSSSATLPSMMKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVF
IAQLNNVELNAGQIFTILVTATASSVGAAGVPAGGVLTIAIILEAIGLPTHDLPLILA
VDWIVDRTTTVVNVEGDALGAGILHHLNQKATKKGEQELAEVKVEAIPNCKSEEETSP
LVTHQNPAGPVASAPELESKESVL"
BASE COUNT 1046 a 1194 c 1172 g 1150 t
ORIGIN
1 cccgcactct gcgcctctcc tcgcctttct cgcacctgct cctgcgccag gccgcgagac
61 ccccggggcg gcttcccaga acctgcggag cacaactggc cgaccgaccc attcattggg
121 aaccccgtct tttgccagag cccacgtccc ctgccacctc tagctcggag cggcgtgtag
181 cgccatggag aagagcaacg agaccaacgg ctaccttgac agcgctcagg cggggcctgc
241 ggccgggccc ggagctccgg ggaccgcggc gggacgcgca cggcgttgcg cgggcttcct
301 gcggcgccaa gcgctggtgc tgctcaccgt gtccggggtg ctggcgggcg cgggcctggg
361 cgcggcgttg cgcgggctca gcctgagccg cacgcaggtc acctacctgg ccttccccgg
421 cgagatgctg ctccgcatgc tgcgcatgat catcctgccg ctggtggtct gcagcctggt
481 gtcgggcgcc gcctccctcg atgccagctg cctcgggcgt ctgggcggca tcgctgtcgc
541 ctactttggc ctcaccacac tgagtgcctc ggcgctcgcc gtggccttgg cgttcatcat
601 caagccagga tccggtgcgc agacccttca gtccagcgac ctggggctgg aggactcggg
661 gcctcctcct gtccccaaag agacggtgga ctctttcctc gacctggcca gaaacctgtt
721 tccctccaat cttgtggttg cagctttccg tacgtatgca accgattata aagtcgtgac
781 ccagaacagc agctctggaa atgtaaccca tgaaaagatc cccataggca ctgagataga
841 agggatgaac attttaggat tggtcctgtt tgctctggtg ttaggagtgg ccttaaagaa
901 actaggctcc gaaggagaag acctcatccg tttcttcaat tccctcaacg aggcgacgat
961 ggtgctggtg tcctggatta tgtggtacgt acctgtgggc atcatgttcc ttgttggaag
1021 caagatcgtg gaaatgaaag acatcatcgt gctggtgacc agcctgggga aatacatctt
1081 cgcatctata ttgggccatg ttattcatgg aggaattgtt ctgccactta tttattttgt
1141 tttcacacga aaaaacccat tcagattcct cctgggcctc ctcgccccat ttgcgacagc
1201 atttgctacc tgctccagct cagcgaccct tccctctatg atgaagtgca ttgaagagaa
1261 caatggtgtg gacaagagga tcagcaggtt tattctcccc atcggggcca ccgtgaacat
1321 ggacggagca gccatcttcc agtgtgtggc cgcggtgttc attgcgcaac tcaacaacgt
1381 agagctcaac gcaggacaga ttttcaccat tctagtgact gccacagcgt ccagtgttgg
1441 agcagcaggc gtgccagctg gaggggtcct caccattgcc attatcctgg aggccattgg
1501 gctgcctact catgacctgc ctctgatcct ggctgtggac tggattgtgg accggaccac
1561 cacggtggtg aatgtggaag gggatgccct gggtgcaggc attctccacc acctgaatca
1621 gaaggcaaca aagaaaggcg agcaggaact tgctgaggtg aaagtggaag ccatccccaa
1681 ctgcaagtct gaggaggaga catcgcccct ggtgacacac cagaaccccg ctggccccgt
1741 ggccagtgcc ccagaactgg aatccaagga gtcggttctg tgatggggct gggctttggg
1801 cttgcctgcc agcagtgatg tcccaccctg ttcacccagc cgccagtcat ggacacaggg
1861 cactgccctt gccaactttt accctcccaa gcaatgcttt ggcccagtcg ctggcctgag
1921 gcttacctct cggcactggc attgggctcc ccagccggaa ctggttacca aggacaagga
1981 cactctgaca ttcggcttga tccatgtcca ggtgcaactg tgtgtacacc agggatctgt
2041 ttggaaacaa ccccttgagc tgccaggctc aagaaatcat ggactcacag ggtcctgtgt
2101 ggttacatct tggaaaaaat gcagatgtat ttcactctcc ccggtcagct ctgcatcagg
2161 tgttttctga gcaaaccaag ggggtttata gtcatctgtc gcattgcctc gagttgcagt
2221 aattgaaaaa atgctcaaat tcttagccat ggctggcctt tgctgagctg ggactcaggt
2281 gtttaaagag tttgtgctat agctaggtgt ggatagcttc tgatccctgg gttctgggag
2341 actgcaggtg ccgcacattg tcaagttaga aatactccag gtgggtgtta gcactgtggt
2401 ggtctctggt ccacagcctt aggtaaacaa cttagattct gaggtcaaag aaaaaaggag
2461 agggaatgca gccttgtggg ggagaagcgg ggcagagggt tctctaatct aatcaggaca
2521 ggacaggttt cacatacaat tgtcccagtt cgcatcccag ccctggggca cttttctgct
2581 tccttccaga ggcctgggcc tctgataaca ctttggcttt ttctccattc acgctgattt
2641 ggcaaaaggc cagagatggg cctccttccc tggggaggtg tgatgtagtt atcacattca
2701 ggacccttgt tgatttatca tctattattt gaattcaact ggacactctg taaaatgctg
2761 cactgcagca aaaacaaaac caccaccacc ccagagaaaa ccatgtacta attggagtgg
2821 ggtaccccca ttcacaggtt cccaggtccc ctggctttgg ctgatttcaa aatatagagc
2881 cctttcttgc cagtacatcc aagtttaaaa ttatcagcga aatggtccat gtttttccaa
2941 ttacctgctg acacggttct aagctaagtg aaggggaaga tctgagagcg tgctgtttgt
3001 ggctgttgat gcatattcgt gatgtaacag gtcctggggc ctcactttac cccatttgta
3061 aaatggggct aatgtcacct gcctcttacc tacctcagag ggatttggtg aagcaaactg
3121 ttaatcttcg aaaacgacca tttcacttct tggatatcaa gtgctaaccc agtatgttct
3181 tcttttttat gtaagggaca gctttggaga aaggactgct ctgtggagca gagtcctttc
3241 tgctggtgag gacagcattt ctgagcaggg ctttgttctc tatgtgcatt aggactttta
3301 tcatgccctt gttctgtgtg tagttacttg acagcatcaa atgccgcctc ttcctaatgt
3361 ccttcaagtt ttcatgaact agcaacccca ccttccacca tggttctggg cgcctgattt
3421 tgctgtgact cccagaccca gccactgttt ctgccaccct gtaacaggcc attaaagctc
3481 cccagtgttc agcctccttc actcccttgt tttccctgtt gctatgtgtc acctgggccc
3541 tacagacagg ggcacacgct tatggatgtg tgtaccattg agatgagaat gggtagatgg
3601 aacggagacc atcaagccac acccccttct taaaactggg gacatgagcc tgagcagaaa
3661 gggtgaagaa gagccatggg acacagagtt gacccagcca gggggaaagc ccagctctct
3721 ttaaaccagc taagccattc cagtctcctg tgaagccaaa agggaccagg aaccgtgcaa
3781 aggaaactgg aaacttttcc ccgctgggta gagcatgttg ctgatactct tctgttttca
3841 agggaaacaa tcacattgtt tgattccaaa tggtaaatga acactcacta ttcttcaggc
3901 ttcagtaaat ctttttttct tccttcatat atatatacac aacacacaca cacatatgta
3961 tatctataca cacatgtgtg ttgtgtatat gcatgtgtgt gtgtgtgcgt gtgtgtatag
4021 ttttagctcc aagccaagca agtttgtgtt tggatagagg ggaacttaac tattaactac
4081 aagttgtatg tctgtggtat cttgattttc ccatttctaa agatgaattt cacaaagcca
4141 taaagcgtga aattagagct ggacttaaga ctcattggcc gaccatcctg tgtcctggcc
4201 tggccctgca gtaagaagcg tgtctgggtc tggagaaggg tgcttccgag agtgtgcagg
4261 tggcccttcc ccttggaggc gagaagagag aatgtgctgt ctatcttcct ggttttcagt
4321 ccacagagtc ggtagaccag gggttacgtg actggggaaa atctcacatc tccttgtctg
4381 aaaacatttc ccctgctgtt ctctttctaa catgttgtgg taaatctgtt cagatactgc
4441 tcatctgact gttttgtaca tgtgacaatt gccttaaaac ctagcacagt cctcagaaat
4501 gaataccgtg tttccactgg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4561 aa
//