LOCUS BC026029 2848 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens PDZ and LIM domain 5, mRNA (cDNA clone IMAGE:5428538).
ACCESSION BC026029
VERSION BC026029.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2848)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2848)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026029.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32967590.
FEATURES Location/Qualifiers
source 1..2848
/db_xref="H-InvDB:HIT000091162"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5428538"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
BASE COUNT 866 a 588 c 633 g 761 t
ORIGIN
1 gcatatttca ttttctgtca ttggactttg agccattaga accatgagca actacagtgt
61 gtcactggtt ggcccagctc cttggggttt ccggctgcag ggcggtaagg atttcaacat
121 gcctctgaca atctctagtc taaaagatgg cggcaaggca gcccaggcaa atgtaagaat
181 aggcgatgtg gttctcagca ttgatggaat aaatgcacaa ggaatgactc atcttgaagc
241 ccagaataag attaagggtt gtacaggctc tttgaatatg actctgcaaa gagcatctgc
301 tgcacccaag cctgagccgg ttcctgttca aaagcccacc aagaaaacac attgtggagc
361 gctatacaga gttttatcat gtacccactc acagtgatgc cagcaagaag agactgattg
421 aggatactga agactggcgt ccaaggactg gaacaactca gtctcgctct ttccgaatcc
481 ttgcccagat cactgggact gaacatttga aagaatctga agccgataat acaaagaagg
541 caaataactc tcaggagcct tctccgcagt tggcttcctc ggtagcttcc acacggagca
601 tgcccgagag cctggacagc ccaacctctg gcagaccagg ggttaccagc ctcacaactg
661 cagctgcctt caagcctgta ggatccactg gcgtcatcaa gtcaccaagc tggcaacggc
721 caaaccaagg agtaccttcc actggaagaa tctcaaacag cgctgcttac tcaggatcag
781 tggcaccagc caactcagct ttgggacaaa cccagccaag tgaccaggac actttagtgc
841 aaagagctga gcacattcca gcagggaaac gaactccgat gtgcgcccat tgtaaccagg
901 tcatcagagg accattctta gtggcactgg ggaaatcttg gcacccagaa gaattcaact
961 gcgctcactg caaaaataca atggcctaca ttggatttgt agaggagaaa ggagccctgt
1021 attgtgagct gtgctatgag aaattctttg cccctgaatg tggtcgatgc caaaggaaga
1081 tccttggaga agtcatcaat gcgttgaaac aaacttggca tgtttcctgt tttgtgtgtg
1141 tagcctgtgg aaagcccatt cggaacaatg tttttcactt ggaggatggt gaaccctact
1201 gtgagactga ttattatgcc ctctttggta ctatatgcca tggatgtgaa tttcccatag
1261 aagctggtga catgttcctg gaagctctgg gctacacctg gcatgacact tgctttgtat
1321 gctcagtgtg ttgtgaaagt ttggaaggtc agaccttttt ctccaagaag gacaagcccc
1381 tgtgtaagaa acatgctcat tctgtgaatt tttgaaagtc aacagttcag gagaagagaa
1441 ggaatttgaa gagaaaaagg aaaattaaaa ttactaatta atttttagat tcaatattta
1501 tatggagttt tgaaaaataa tagtggccct gaaggaataa attccagctt taaaaaccaa
1561 gtctgaggaa atatttggct tcataaagta aagagacggt ttggcattta ttattacttt
1621 ttcctgtatt ttatgcccat aaaataagct ttataaaaac caatttcctg atggactatt
1681 aaattcatct tagaataaat tagtgaagaa tttaatttta gaataaataa tccaatctga
1741 aataattata ccttctttcc ttgttaggta gttatgagta aatctgcaaa aggcaatgaa
1801 aatgccttaa attttatcaa taacagaatt attgtattta aaaaaaaact aatacttatc
1861 tttaaaatag taaataggat tttaaacaga gaattttatc agtaataggt gtcagttttt
1921 aaaaaattgc ttgtaggctg agcgcggtgg ctcacgcctg taatcccagc actttgggag
1981 gccaaggtgg gtggaccaca tgaggtcagg agtttgagat cagcctggcc aacatggtga
2041 aaccccatct ctactaaaaa tacaaaaatt agccggacgc agtggcacgc gcctgtaatc
2101 ccagctactc aagaggctga ggcacgagaa tcacttgaac ccgggaggga gaggttgcag
2161 tgagccaaga tcgtaccact gcactccagc ctgggtgaca gagtgagact ctgtctccaa
2221 aaaaaacttt gcttgtatat tatttttgcc ttacagtgga tcattctagt aggaaaggac
2281 aataagattt tttatcaaaa tgtgtcatgc cagtaagaga tgttatattc ttttctcatt
2341 tcttccccac ccaaaaataa gctaccatat agcttataag tctcaaattt ttgcctttta
2401 ctaaaatgtg attgtttcta ttcattgtgt atgcttcatc acctatatta ggcaaattcc
2461 atttttttcc cttgtgctaa ggtaaagatt taattaaata attttggcct ctcatagttt
2521 tctctctctt taaagagaat aaatagaggg ccaggtgtgg tggctcacgc ctgtgatccc
2581 agcactttgg gaggccaaga cgggcggatc atgaggtcaa gagatcaaga tcatcctggc
2641 caacatggtg aaaccctgtc tctactaaaa atacaaaaat gagctgggca tggtggggcg
2701 tgcctgtagt cccatgtact tgggaggctg aggcaggaaa attcttgaac ccaggagacg
2761 gaagttgcag tgagctgaga tcacaccact gcactccagc ctggtgacag agcaagactc
2821 cggctcttaa aaaaaaaaaa aaaaaaaa
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