LOCUS BC025388 1386 bp mRNA linear HUM 28-JUL-2006
DEFINITION Homo sapiens ring finger protein 113B, mRNA (cDNA clone MGC:26587
IMAGE:4824788), complete cds.
ACCESSION BC025388
VERSION BC025388.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1386)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1386)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: j Column: 16.
FEATURES Location/Qualifiers
source 1..1386
/db_xref="H-InvDB:HIT000039920"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26587 IMAGE:4824788"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1386
/gene="RNF113B"
/gene_synonym="bA10G5.1"
/gene_synonym="MGC26599"
/gene_synonym="RNF161"
/db_xref="GeneID:140432"
/db_xref="HGNC:HGNC:17267"
CDS 25..993
/gene="RNF113B"
/gene_synonym="bA10G5.1"
/gene_synonym="MGC26599"
/gene_synonym="RNF161"
/codon_start=1
/product="ring finger protein 113B"
/protein_id="AAH25388.1"
/db_xref="GeneID:140432"
/db_xref="HGNC:HGNC:17267"
/translation="MAAPPSPGRTADQADQVCTFLFKKPGRKGAAGLRKRPACDPEHG
ESSSSGDEGDTVAQPPRVAPRPRGLHSWQKAAHGDRRGEEAAPESLDVVYRSTRSAKP
VGPEDMGATADFEQDTEKEHHTPTILKCSQRVQEALRGREHDHIYRGIHSYLRYLKPK
DTSMGNSSSGMARKGPIRAPGHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRS
DYKLGWEIERELEEGRYCICEDENHEVGSEEEEIPFRCFICRQAFQNPVVTKCRHYFC
ESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKLQAAEGKKR"
BASE COUNT 392 a 368 c 402 g 224 t
ORIGIN
1 agcgggggag cctgagactc aaacatggca gcgccacctt ctccaggaag gacggccgac
61 caagcagacc aggtatgcac cttcctcttc aaaaagcctg gacggaaagg ggctgcaggc
121 ctcagaaagc gcccggcctg cgaccccgag cacggagaga gcagcagcag cggggacgag
181 ggcgacacag tggctcagcc cccgcgggtg gcaccgaggc cccggggcct ccacagctgg
241 cagaaggcgg ctcacggcga caggaggggc gaggaggcgg cgcctgagag cctcgacgtg
301 gtgtacaggt ccacccgctc ggcgaagcct gtggggccgg aggacatggg ggccaccgct
361 gacttcgagc aggacaccga gaaggagcac catacgccga ccatcctcaa gtgcagccag
421 cgggtccagg aggcactgcg gggtcgggag cacgaccaca tctaccgggg aatccacagc
481 tacctgaggt acctgaagcc caaggacacg tccatgggca actcctcctc ggggatggcg
541 aggaagggcc ccatacgtgc gccagggcat ctgcgcgcca ctgtgcgctg ggattaccag
601 cctgacatct gcaaggacta caaggagact ggcttctgtg gcttcgggga cagctgcaaa
661 ttcctccacg accgttccga ttacaagctc gggtgggaga ttgaacggga gcttgaagag
721 ggtcgctact gtatctgcga ggacgaaaac catgaagtgg gaagcgagga agaggaaata
781 ccattcaggt gtttcatatg tcgccaggcc ttccaaaacc cagtcgtcac caagtgcagg
841 cattatttct gcgagagctg cgcgctggag cacttccggg ccaccccgcg ctgctacatc
901 tgtgaccagc caaccggcgg catctttaac cccgccaaag aactgatggc gaaactgcaa
961 aagcttcagg ctgcagaagg aaaaaagaga taagaaagac tcaagtctgt atgtacactg
1021 gggagaagca gcctgttgag taagatgaga gagatgacag tcttcctgca atcccatgcc
1081 tgagtatgta accaaaagaa ttgaaatccg gatctcaaag aggtatgtgc actcccatgt
1141 tcactgcagt attatttgca aaagccaaga ggtgtaaaca acccaagtgt ccatggatgg
1201 atgaatggac aaacaaaatg cgatacacac acacaatgga atgctattaa gccttaacgg
1261 gaaggaaatc ctcttaaaga tttaaactga tccttttaag gatcacatgc tacaactaga
1321 atgaaccttg aagacgacac tgctaagtga aataaactag tcacaaaacg aaaaaaaaaa
1381 aaaaaa
//