LOCUS BC025253 1976 bp mRNA linear HUM 04-NOV-2003 DEFINITION Homo sapiens oculocerebrorenal syndrome of Lowe, mRNA (cDNA clone IMAGE:4864910), partial cds. ACCESSION BC025253 VERSION BC025253.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1976) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1976) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC025253.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: h Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21396493. FEATURES Location/Qualifiers source 1..1976 /db_xref="H-InvDB:HIT000091007" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4864910" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1976 /gene="OCRL" /gene_synonym="INPP5F" /gene_synonym="LOCR" /gene_synonym="OCRL1" /db_xref="GeneID:4952" /db_xref="MIM:309000" CDS <1..370 /gene="OCRL" /gene_synonym="INPP5F" /gene_synonym="LOCR" /gene_synonym="OCRL1" /codon_start=2 /product="OCRL protein" /protein_id="AAH25253.1" /db_xref="GeneID:4952" /db_xref="MIM:309000" /translation="VGVGTREPVSSDRPAVRCPAEPGGRLDGAAAPGRSPAACLEGME MKGPLREPCALTLAQRNGQYELIIQLHEKEQHVQDIIPINSHFRCVQEAEETLLIDIA SNSGCKIQFLLGFLLGSEED" BASE COUNT 562 a 424 c 411 g 579 t ORIGIN 1 ggtgggtgtg gggacgcggg agccagtgtc gtcggatcgg cccgcagtcc gctgtcctgc 61 tgagcccgga ggccgcctgg atggagccgc cgctcccggt cggagcccag ccgcttgcct 121 cgagggtatg gagatgaagg gtcctctccg ggagccctgc gccctgaccc tagcccagag 181 gaacgggcaa tatgagttaa taatccagtt gcatgagaag gaacagcatg ttcaagatat 241 cattcctata aatagccact tcagatgtgt tcaagaagca gaagaaactc ttttgattga 301 catagcttct aacagtggct gcaaaattca gttccttctg ggctttctgc ttgggagcga 361 agaagactaa ggcttttact gttctctgat attctagaag cagacgatct cgggctccaa 421 gtatttcaga atgatttaaa aagtcatgcc acaggaaggg tctattgcag aatttcaagt 481 tctgtttata gtaaaaagga agagcgtttc ctaatccctc ctttaccata tcctacacag 541 aaaaatactt ttagacttat attgccaagc caaagttacc atattttggt gtttttgtgt 601 tttctcttta taaggcaaaa agatctgtat ttacactcct tcacctaggg atgtgtttgt 661 tgccctccta cccaattgtc atgattgtcc ttagtaccct aggcctagat tctgagatct 721 tcccattcta ggcctacaag cactacttgc tgtagctgag acttgtctag agtcctttgt 781 tttgcacttt tgacccaccc cttcctggat cactcctttg cactccactc ccctcgttct 841 gtcactttga acgaagtctg agtgaggcta gtgactcctt gggtgtcctc aacagtgaat 901 tcactgtctg cgtgcagtta ttacatgcat ttgtgcattt ctactacaat ggcatcttta 961 tgtctctgta acattggcct tttcatggct ccacactggg tggaaccata ttctcttaga 1021 tcacatttag tagcataact gtagggacta ttagagatgg catctcatcg atgagagaga 1081 atcacaatca gaatggaagc actttgagta tctgaagagt gagagcattc atgtttgaca 1141 ggtcctgctt cccactatcc ttttcctgtt attattcaaa ttttacacaa ggactaatcc 1201 tgggtgtctc tgagacccat ctcctgccta gacatccacc tccagaaagt gatcacaaaa 1261 agaggcagat gatagacact ggggtagggt cataccacag ggaaatacct ttcctgggct 1321 tgttttctag catatcactg acctgggatc tttgggtgat caagggtgtg gttagtggag 1381 gctctgtgct gcacgtatgc agtatcctat ctctttctac atcagatcaa aacactaagt 1441 tggtgtactg cctcgacctt ttttcagctc atcctggaac atatacagag ttgagagttt 1501 tagacaatct ctaggtagag gagacaagat gtagacccag acagaagaaa tctgcttccc 1561 taccatggct attccagcac cccaacctgt aattgccaag tcctctaagg tactaatttg 1621 tagctgctct gaagtaagga tttcggattc agctggtagg gaaagactct gcacctgctg 1681 tcttagggaa gaaatggttc aaatccatgt ggtgacattg cattagtctc cctttcactg 1741 ttttcttatt ctgtaattgt ttgttatatt tcccaaaaac gtcttgatca ctaagcaaag 1801 ctgctagtgg gattctatat ttcgtgtcat cttttttatt ataatttatt gcaaattttt 1861 ttctgaataa atatatgttg tgtgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //