LOCUS BC022949 2077 bp mRNA linear HUM 10-JUN-2003
DEFINITION Homo sapiens peptidase (mitochondrial processing) alpha, mRNA (cDNA
clone IMAGE:3857242), partial cds.
ACCESSION BC022949
VERSION BC022949.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2077)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2077)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: a Column: 23.
FEATURES Location/Qualifiers
source 1..2077
/db_xref="H-InvDB:HIT000090719"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3857242"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2077
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="INPP5E"
/gene_synonym="KIAA0123"
/db_xref="GeneID:23203"
CDS <1..1566
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="INPP5E"
/gene_synonym="KIAA0123"
/codon_start=1
/product="PMPCA protein"
/protein_id="AAH22949.1"
/db_xref="GeneID:23203"
/translation="VLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPL
PGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS
GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVV
ALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLH
RFCPTENVAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGS
AEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFA
VLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASA
DPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVL
ATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALCDLTDLPTYEHIQTALSS
KDGRLPRTYRLFR"
BASE COUNT 476 a 555 c 613 g 433 t
ORIGIN
1 gtgctggcgg cgacgcggtt gctgcggggc tcgggttctt ggggctgttc gcggctgagg
61 tttggacctc ctgcgtacag acggtttagt agtggtggtg cctatcccaa catccccctc
121 tcttctccct tacctggagt acccaagcct gtttttgcta cagttgatgg acaggaaaag
181 tttgaaacca aagtaaccac attggataat gggcttcgcg tggcatctca gaataagttt
241 ggacagtttt gtacagtagg aattcttatc aattcaggat cgagatatga agcgaaatac
301 cttagtggaa ttgctcactt tttggaaaaa ttggcatttt cgtctactgc tcgatttgac
361 agcaaagatg aaattctgct tacgttggaa aagcatgggg gtatctgtga ctgccagaca
421 tcaagagaca ccaccatgta tgctgtgtct gctgatagca aaggcttgga cacggtggtt
481 gccttactgg ctgatgtggt tctgcagccc cggctaacag atgaagaagt cgagatgacg
541 cggatggcgg tccagtttga gctggaggac ctgaacctgc ggcctgaccc agagccactt
601 ctcaccgaga tgattcatga agcggcttac agggagaaca cagttggcct ccaccgtttc
661 tgccccacag aaaacgtagc aaagatcaac cgagaggtgc tgcattccta cctgaggaac
721 tactacactc ccgaccgcat ggtgctggcc ggcgtgggcg tggagcacga gcatctggtg
781 gactgtgccc ggaagtacct cctgggggtc cagccggcct gggggagcgc agaggccgtg
841 gatattgaca gatctgtggc ccagtacact ggggggattg ccaagctaga aagagacatg
901 tccaatgtca gcctgggccc gacccccatc cccgagctca cgcacatcat ggttggactg
961 gagagctgct ccttcctgga ggaggacttc atcccctttg cagtgttgaa catgatgatg
1021 ggcggaggtg gctccttctc ggctggtggg cccggcaagg gcatgttctc caggctctac
1081 ctcaacgtgc tcaacaggca ccactggatg tataacgcga cctcctacca ccacagctac
1141 gaggacactg gcctcctttg catccatgcc agcgccgacc caagacaggt tcgagaaatg
1201 gtagaaatca tcacaaagga gtttatttta atgggcggaa ccgtggacac ggtggagctg
1261 gaacgagcca agacgcagct gacatcaatg ctcatgatga acctggaatc caggcctgtg
1321 atcttcgagg atgtggggag gcaggtgctg gccactcgct ccagaaagct gccgcacgag
1381 ctgtgcacgc tcatccgcaa cgtgaagccg gaagatgtga agagagtcgc ttctaagatg
1441 ctccgaggga agccggcagt ggccgccctg tgtgacctga ctgacctgcc cacgtatgag
1501 cacatccaga ccgccctgtc gagtaaggac gggcgcctgc ccaggacgta ccggctcttc
1561 cggtagaacc gctccccggc ctgacagacc cagggagctg cagctggagc ccgttcccgt
1621 gcgtgttagt ttggacacga atttagtcta aaaagctgtc tggttgtata aacggtgcaa
1681 acaatgtcgc cacagcaccc acgcggtttg cattcttttg gaactcaatg tgccgatcag
1741 tggagtcagt atcgagcctg accaccgcaa gccaggaagc aggtgaagtg cccagcgctg
1801 gagtgcagcg tgccacgagg agggcggtcg gtgcttccct cctcgggctg tgggcacatg
1861 gggccccgca ggttccttgg aggagccctg agctgggagg cagcaaaggc tgacctatca
1921 aagcctcccg gaggccaccg tgctgggtac caggactcac ctctgacaag caggagaagg
1981 taagggcccg gtcagctcca aggagcgcgc tccacgcgcg tgcacacagc ttccctggta
2041 ataaagagct ggcatctttc ttaaaaaaaa aaaaaaa
//