LOCUS       BC022551                2005 bp    mRNA    linear   HUM 19-JUN-2006
DEFINITION  Homo sapiens claudin domain containing 1, mRNA (cDNA clone
            MGC:26832 IMAGE:4818672), complete cds.
ACCESSION   BC022551
VERSION     BC022551.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2005)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 32 Row: o Column: 11
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 11096339.
FEATURES             Location/Qualifiers
     source          1..2005
                     /db_xref="H-InvDB:HIT000039624"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:26832 IMAGE:4818672"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2005
                     /gene="CLDND1"
                     /gene_synonym="GENX-3745"
                     /gene_synonym="MGC111162"
                     /gene_synonym="MGC3316"
                     /gene_synonym="MGC9861"
                     /db_xref="GeneID:56650"
                     /db_xref="HGNC:HGNC:1322"
     CDS             53..814
                     /gene="CLDND1"
                     /gene_synonym="GENX-3745"
                     /gene_synonym="MGC111162"
                     /gene_synonym="MGC3316"
                     /gene_synonym="MGC9861"
                     /codon_start=1
                     /product="claudin domain containing 1"
                     /protein_id="AAH22551.1"
                     /db_xref="GeneID:56650"
                     /db_xref="HGNC:HGNC:1322"
                     /translation="MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSS
                     DLNKSIWDEFISDEADEKTYNDALFRYNGTVGLWRRCITIPKNMHWYSPPERTESFDV
                     VTKCVSFTLTEQFMEKFVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLC
                     ACICRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLELPDNVSGEFGWSFCL
                     ACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA"
BASE COUNT          595 a          379 c          363 g          668 t
ORIGIN      
        1 agggggtgaa gctggcggag caggaggatg ggcgagcagt ctgaatgcca gaatggataa
       61 ccgttttgct acagcatttg taattgcttg tgtgctgagc ctcatttcca ccatctacat
      121 ggcagcctcc attggcacag acttctggta tgaatatcga agtccagttc aagaaaattc
      181 cagtgatttg aataaaagca tctgggatga attcattagt gatgaggcag atgaaaagac
      241 ttataatgat gcactttttc gatacaatgg cacagtggga ttgtggagac ggtgtatcac
      301 catacccaaa aacatgcatt ggtatagccc accagaaagg acagagtcat ttgatgtggt
      361 cacaaaatgt gtgagtttca cactaactga gcagttcatg gagaaatttg ttgatcccgg
      421 aaaccacaat agcgggattg atctccttag gacctatctt tggcgttgcc agttcctttt
      481 accttttgtg agtttaggtt tgatgtgctt tggggctttg atcggacttt gtgcttgcat
      541 ttgccgaagc ttatatccca ccattgccac gggcattctc catctccttg caggtctgtg
      601 tacactgggc tcagtaagtt gttatgttgc tggaattgaa ctactccacc agaaactaga
      661 gctccctgac aatgtatccg gtgaatttgg atggtccttc tgcctggctt gtgtctctgc
      721 tcccttacag ttcatggctt ctgctctctt catctgggct gctcacacca accggaaaga
      781 gtacacctta atgaaggcat atcgtgtggc atgagcaaga aactgcctgc tttacaattg
      841 ccatttttat ttttttaaaa taatactgat attttcccca cctctcaatt gtttttaatt
      901 tttatttgtg gatataccat tttattatga aaatctattt tatttataca cattcaccac
      961 taaatacaca cttaatacca ctaaaattta tgtggtttac tttaagcgat gccatctttc
     1021 aaataaacta atctaggtct agacagaaag aaatggatag agacttgaca caaatttatg
     1081 aaagaaaatt gggagtagga atgtgaccga aaacaagttg tgctaatgtc tgttagactt
     1141 ttcagtaaaa ctaaagtaac tgtatctgtt caactaaaaa ctctatatta gtttctttgg
     1201 gaaacctctc atcgtcaaaa ctttatgttc actttgctgt tgtagatagc cagtcaacca
     1261 gcagtattag tgctgttttc aaagatttaa gctctataaa attgggaaat tatctaagat
     1321 cattttccct aagcattgac acatagcttc atctgaggtg agatatggca gctgtttgta
     1381 tctgcactgt gtctgtctac aaaaagtgaa aaatacagtg tttacttgaa attttaactt
     1441 tgtaactgca agaattccag ttcagccggg cgaggattag tattattttt aactctccgt
     1501 aagattttca gtaccaccaa attgttttgg attttttttc tttcctcttc acataccagg
     1561 gttattaaaa gtgtgctttc tttttacatt atattacagt tacaaggtaa aattcctcaa
     1621 ctgctattta tttattccag cccagtacta taaagaacgt ttcaccataa tgaccctcca
     1681 gagctgggaa acctaccaca agatctaaag ttctggctgt ccattaacct ccaactatgg
     1741 tctttatttc ttgtggtaat atgatgtgcc tttccttgcc taaatccctt cctggtgtgt
     1801 atcaacatta tttaatgtct tttaattcag tcattttttt ataagtatgt ctataaacat
     1861 tgaacttaaa aaaacttatt tatttattcc actactgtag caattgacag attaaaaaaa
     1921 tgtaacttca taatttctta ccataacctc aatgtctttt ttaaaaaata aaattaaaaa
     1981 tgaaaagaga aaaaaaaaaa aaaaa
//