LOCUS BC021556 1772 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PDZ and LIM domain 2 (mystique), mRNA (cDNA clone
MGC:31819 IMAGE:3959372), complete cds.
ACCESSION BC021556
VERSION BC021556.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40288187.
FEATURES Location/Qualifiers
source 1..1772
/db_xref="H-InvDB:HIT000039213"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31819 IMAGE:3959372"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1772
/gene="PDLIM2"
/gene_synonym="FLJ34715"
/db_xref="GeneID:64236"
/db_xref="HGNC:HGNC:13992"
/db_xref="MIM:609722"
CDS 271..1329
/gene="PDLIM2"
/gene_synonym="FLJ34715"
/codon_start=1
/product="PDZ and LIM domain 2 (mystique)"
/protein_id="AAH21556.1"
/db_xref="GeneID:64236"
/db_xref="HGNC:HGNC:13992"
/db_xref="MIM:609722"
/translation="MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLR
PGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLAT
RFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLAC
SPGLPAADRLSYSGRPGSRQAGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDE
DSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRA
LATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYC
EKHARQRYSAPATLSSRA"
BASE COUNT 353 a 588 c 531 g 300 t
ORIGIN
1 gccctccccg gcgccgggct cctctccgcg cccctgtcgg cgcggaaccc tggcctcgtc
61 cgcggcccag ctccctggag cctcgcgtca gcgggggcgc ccccgcgagc tgcgctctcc
121 ccggccggag cgctcctcct ccagccccca gcccgcaggg tactttgccc tcggagcgaa
181 ggaggctcca gaactggtag agccgggcca tcgggctggg cacctccccg cggcgcccgc
241 agcgcggagt ccactgaccg gctcaaaggt atggcgttga cggtggatgt ggccgggcca
301 gcgccctggg gcttccgtat cacagggggc agggatttcc acacgcccat catggtgact
361 aaggtggccg agcggggcaa agccaaggac gctgacctcc ggcctggaga cataatcgtg
421 gccatcaacg gggaaagcgc ggagggcatg ctgcatgccg aggcccagag caagatccgc
481 cagagcccct cgcccctgcg gctgcagctg gaccggtctc aggctacgtc tccagggcag
541 accaatgggg acagctcctt ggaagtgctg gcgactcgct tccagggctc cgtgaggaca
601 tacactgaga gtcagtcctc cttaaggtcc tcctactcca gcccaacctc cctcagcccg
661 agggccggca gccccttctc accaccaccc tctagcagct ccctcactgg agaggcagcc
721 atcagccgca gcttccagag tctggcatgt tccccgggcc tccccgctgc tgaccgcctg
781 tcctactcag gccgccctgg aagccgacag gccggcctcg gccgcgctgg cgactcggcg
841 gtgctggtgc tgccgccttc cccgggccct cgttcctcca ggcccagcat ggactcggaa
901 gggggaagcc tcctcctgga cgaggactcg gaagtcttca agatgctgca ggaaaatcgc
961 gagggacggg cggccccccg acagtccagc tcctttcggc tcttgcagga agccctggag
1021 gctgaggaga gaggtggcac gccagccttc ttgcccagct cactgagccc ccagtcctcc
1081 ctgcccgcct ccagggccct ggccacccct cccaagctcc acacttgtga gaagtgcagt
1141 accagcatcg cgaaccaggc tgtgcgcatc caggagggcc ggtaccgcca ccccggctgc
1201 tacacctgtg ccgactgtgg gctgaacctg aagatgcgcg ggcacttctg ggtgggtgac
1261 gagctgtact gtgagaagca tgcccgccag cgctactccg cacctgccac cctcagctct
1321 cgggcctgag cccgccatgc cctcagcctg cctcactgct gggccagggt catgcctata
1381 taagttggca tggcagggac aatggtgggc agttgctctt acatgagcta agtttggaga
1441 cctgaggccc ctttgtcctc gctgggtggg ccaaggtctg ggacctgtct tggactgtgg
1501 gagactcacc ctcaccttgc caggcctctc ccctgcagga ctggcattgc actagtctga
1561 ggtggccact gcctttgatc aacctttgtg tgcgagggtc taagtagggt cgaacacaga
1621 agtgggaagg agaggggtgg gccaggggct aatggtgtca ctgtgtaaag tttttgacat
1681 actagctcta taaatatatg aatatggaca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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