LOCUS BC020797 2053 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5,
mRNA (cDNA clone MGC:23779 IMAGE:4134658), complete cds.
ACCESSION BC020797
VERSION BC020797.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2053)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2053)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: a Column: 10.
FEATURES Location/Qualifiers
source 1..2053
/db_xref="H-InvDB:HIT000038967"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23779 IMAGE:4134658"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2053
/gene="ARL6IP5"
/gene_synonym="addicsin"
/gene_synonym="DERP11"
/gene_synonym="GTRAP3-18"
/gene_synonym="hp22"
/gene_synonym="HSPC127"
/gene_synonym="jmx"
/gene_synonym="JWA"
/gene_synonym="PRAF3"
/db_xref="GeneID:10550"
/db_xref="HGNC:HGNC:16937"
/db_xref="MIM:605709"
CDS 27..593
/gene="ARL6IP5"
/gene_synonym="addicsin"
/gene_synonym="DERP11"
/gene_synonym="GTRAP3-18"
/gene_synonym="hp22"
/gene_synonym="HSPC127"
/gene_synonym="jmx"
/gene_synonym="JWA"
/gene_synonym="PRAF3"
/codon_start=1
/product="ADP-ribosylation-like factor 6 interacting
protein 5"
/protein_id="AAH20797.1"
/db_xref="GeneID:10550"
/db_xref="HGNC:HGNC:16937"
/db_xref="MIM:605709"
/translation="MDVNIAPLRAWDDFFPGSDRFARPDFRDISKWNNRVVSNLLYYQ
TNYLVVAAMMISIVGFLSPFNMILGGIVVVLVFTGFVWAAHNKDVLRRMKKRYPTTFV
MVVMLASYFLISMFGGVMVFVFGITFPLLLMFIHASLRLRNLKNKLENKMEGIGLKRT
PMGIVLDALEQQEEGINRLTDYISKVKE"
BASE COUNT 657 a 365 c 412 g 619 t
ORIGIN
1 gaggcgaaga acgcaaagct gagaacatgg acgttaatat cgccccactc cgcgcctggg
61 acgatttctt cccgggttcc gatcgctttg cccggccgga cttcagggac atttccaaat
121 ggaacaaccg cgtagtgagc aacctgctct attaccagac caactacctg gtggtggctg
181 ccatgatgat ttccattgtg gggtttctga gtcccttcaa catgatcctg ggaggaatcg
241 tggtggtgct ggtgttcaca gggtttgtgt gggcagccca caataaagac gtccttcgcc
301 ggatgaagaa gcgctacccc acgacgttcg ttatggtggt catgttggcg agctatttcc
361 ttatctccat gtttggagga gtcatggtct ttgtgtttgg cattactttt cctttgctgt
421 tgatgtttat ccatgcatcg ttgagacttc ggaacctcaa gaacaaactg gagaataaaa
481 tggaaggaat aggtttgaag aggacaccga tgggcattgt cctggatgcc ctagaacagc
541 aggaagaagg catcaacaga ctcactgact atatcagcaa agtgaaggaa taaacataac
601 ttacctgagc tagggttgca gcagaaattg agttgcagct tgcccttgtc cagacctatg
661 ttctgcttgc gtttttgaaa caggaggtgc acgtaccacc caattatcta tggcagcatg
721 catgtatagg ccgaactatt atcagctctg atgtttcaga gagaagacct cagaaaccga
781 aagaaaacca ccaccctcct attgtgtctg aagtttcacg tgtgtttatg aaatctaatg
841 ggaaatggat cacacgattt ctttaaggga attaaaaaaa ataaaagaat tacggctttt
901 acagcaacaa tacgattatc ttataggaaa aaaaaaaatc attgtaaagt atcaagacaa
961 tacgagtaaa tgaaaaggct gttaaagtag atgacatcat gtgttagcct gttcctaatc
1021 ccctagaatt gtaatgtgtg ggatataaat tagtttttat tattctctta aaaatcaaag
1081 atgatctcta tcactttgcc acctgtttga tgtgcagtgg aaactggtta agccagttgt
1141 tcatacttcc tttacaaata taaagatagc tgtttaggat attttgttac atttttgtaa
1201 atttttgaaa tgctagtaat gtgttttcac cagcaagtat ttgttgcaaa cttaatgtca
1261 ttttccttaa gatggttaca gctatgtaac ctgtattatt ctggacggac ttattaaaat
1321 acaaacagac aaaaaataaa acaaaacttg agttctattt accttgcaca ttttttgttg
1381 ttacagtgaa aaaaatggtc caagaaaatg tttgccattt ttgcattgtt tcgtttttaa
1441 ctggaacatt tagaaagaag gaaatgaatg tgcattttat taattcctta ggggcacaag
1501 gaggacaata acagctgatc ttttgaaatt tgaaaaacgt ctttagatga ccaagcaaaa
1561 agactttaaa aaatggtaat gaaaatggaa tgcagctact gcagctaata aaaaatttta
1621 gatagcaatt gttacaacca tatgccttta tagctagaca ttagaattat gatagcatga
1681 gtttatacat tctattattt ttcctccctt tctcatgttt ttataaatag gtaataaaaa
1741 atgttttgcc tgccaattga atgatttcgt agctgaagta gaaacattta ggtttctgta
1801 gcattaaatt gtgaagacaa ctggagtggt acttactgaa gaaactctct gtatgtccta
1861 gaataagaag caatgatgtg ctgcttctga tttttcttgc attttaaatt ctcagccaac
1921 ctacagccat gatctttagc acagtgatat caccatgact tcacagacat ggtctagaat
1981 ctgtaccctt acccacatat gaagaataaa attgattaag ggtaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaa
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