LOCUS BC019820 1432 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 15 open reading frame 40, mRNA (cDNA clone
MGC:29937 IMAGE:4449390), complete cds.
ACCESSION BC019820
VERSION BC019820.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389392.
FEATURES Location/Qualifiers
source 1..1432
/db_xref="H-InvDB:HIT000038686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29937 IMAGE:4449390"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1432
/gene="C15orf40"
/gene_synonym="MGC29937"
/db_xref="GeneID:123207"
/db_xref="HGNC:HGNC:28443"
CDS 81..461
/gene="C15orf40"
/gene_synonym="MGC29937"
/codon_start=1
/product="chromosome 15 open reading frame 40"
/protein_id="AAH19820.1"
/db_xref="GeneID:123207"
/db_xref="HGNC:HGNC:28443"
/translation="MPKKAGATTKGKSQSKEPERPLPPLGPVAVDPKGCVTIAIHAKP
GSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREK
VVKLLASTTPEEILEKLKKEAKKT"
BASE COUNT 462 a 286 c 322 g 362 t
ORIGIN
1 tgctgcggct ccgcagcggg ctgaggcact ttcgggcaac acccaatact cggggctccg
61 ctcggcttct tcgcgccgag atgcctaaga aggctggtgc gacgaccaag ggtaaaagcc
121 agagcaagga accagagaga ccacttcctc ccttaggtcc tgtggcagtt gatcctaaag
181 gatgcgtcac catagccatc catgcaaaac ctggctccaa acaaaatgct gtaacagatt
241 tgacagcaga ggctgtaaat gtagctattg cagcacctcc atcagaggga gaggctaatg
301 ctgagctctg tcggtatctt tccaaggtcc tagaactcag gaagagtgat gtggttttgg
361 ataagggtgg taaatctcgt gaaaaggtgg tgaagctttt ggcttctaca actccagaag
421 agatcttgga gaaattaaaa aaggaagcca aaaaaacata aaagcaagaa atgaggccgg
481 gcgcagtggc tcatgcctgt aatcccagca ctttgggagg ccgtggtggg cggatcacct
541 gaggtcagga gttcgagacc agcctgacca acatggtgaa accccatctc tacgaaaaat
601 acaaaattag ccagatgtga tggcgcatgc ctgtaatccc agttactcag gaggctgagg
661 caggagaatc acttgaacct ggggggcgga ggttgcagta agccgagatc gcgccgttgc
721 actccagcct gggcaacaag agtgaaactc tctccccccg aaaaaaaaga aataaaaaat
781 acatccttga gaaacttttt tattgctaat ggtgaagagg ctgttaaata gaaaaatata
841 ctacatgcac agaagaacat gggggacata tatatatgta tatattcgaa taagactcca
901 aaaagtagaa atttaaaaag tgctatacat tgcatcaggt tctaaaatcc caaaccccaa
961 acagcctgga acatgttact ctgatttcat ggcgttgtaa aataacagag ctgggaagaa
1021 tattcaagat gacctgattt aacacctttc attctgttgg ggggcctttg atttcctata
1081 tccagaagtt gagagactta ctcaagattg taccatgcaa gctggcaact agaacccaaa
1141 tccttggact acttgttgaa tgcagttttt ctagattgta aattaaaaat catatctcca
1201 caacggttct ggaattctgg ggattgcctt ctaatccagt ttacaagtga cagaaaacct
1261 gttatgctgc tttgtagtct taccttagat ttttaaatgc ttatttaaat gtaaaaaaaa
1321 ttttttttta catcttttaa agactatatt taccattttg ttgaaaaagt aaagaaaaat
1381 catgacttgt aattaaatgt gaattataat ttttgagaaa aaaaaaaaaa aa
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