LOCUS BC019062 1767 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 12, mRNA (cDNA clone MGC:29570 IMAGE:4111477), complete
cds.
ACCESSION BC019062
VERSION BC019062.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1767)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1767)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC019062.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872726.
FEATURES Location/Qualifiers
source 1..1767
/db_xref="H-InvDB:HIT000038526"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29570 IMAGE:4111477"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1767
/gene="PSMD12"
/gene_synonym="p55"
/db_xref="GeneID:5718"
/db_xref="HGNC:HGNC:9557"
/db_xref="MIM:604450"
CDS 40..1410
/gene="PSMD12"
/gene_synonym="p55"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 12"
/protein_id="AAH19062.1"
/db_xref="GeneID:5718"
/db_xref="HGNC:HGNC:9557"
/db_xref="MIM:604450"
/translation="MADGGSERADGRIVKMEVDYSATVDQRLPECAKLAKEGRLQEVI
ETLLSLEKQTRTASDMVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVA
KMVQQCCTYVEEITDLPIKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDVK
EAASILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEEN
TEKLKLKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSVVLYVIL
APFDNEQSDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRKGSLE
SPATDVFGSTEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAF
LSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEE
MIHNLQ"
BASE COUNT 596 a 301 c 383 g 487 t
ORIGIN
1 cgaagcaggg ggacagcaag ggacgctcag gcggggacca tggcggacgg cggctcggag
61 cgggctgacg ggcgcatcgt caagatggag gtggactaca gcgccacggt ggatcagcgc
121 ctacccgagt gtgcgaagct agccaaggaa ggaagacttc aagaagtcat tgaaaccctt
181 ctctctctgg aaaagcagac tcgtactgct tccgatatgg tatcgacatc ccgtatctta
241 gttgcagtag tgaagatgtg ctatgaggct aaagaatggg atttacttaa tgaaaatatt
301 atgcttttgt ccaaaaggcg gagtcagtta aaacaagctg ttgccaaaat ggttcaacag
361 tgctgtactt atgttgagga aatcacagac cttcctatca aacttcgatt aattgatact
421 ctacgaatgg ttaccgaagg caagatttat gttgaaattg agcgtgcgcg actgactaaa
481 acattagcaa ctataaaaga acaaaatggt gatgtgaaag aggcagcctc cattttacag
541 gagttacagg tggaaaccta cgggtcaatg gaaaagaaag agcgagtgga atttattttg
601 gagcaaatga ggctctgcct agctgtgaag gattacattc gaacacaaat catcagcaag
661 aaaattaaca ccaaattttt ccaggaagaa aatacagaga aattaaagtt gaagtactat
721 aatttaatga ttcagctgga tcaacatgag ggatcctatt tgtctatttg taagcactac
781 agagcaatat atgatactcc ctgtatacag gcagaaagtg aaaaatggca gcaggctctg
841 aagagtgttg tactctatgt tatcctggct ccttttgaca atgaacagtc agatttggtt
901 caccgaataa gtggtgacaa gaagttagaa gaaattccca aatacaagga tcttttaaag
961 ctttttacca caatggagtt gatgcgttgg tccacacttg ttgaggacta tggaatggaa
1021 ttaagaaaag gttcccttga gagtcctgca acggatgttt ttggttctac agaggaaggt
1081 gaaaaaaggt ggaaagactt gaagaacaga gttgttgaac ataatattag aataatggcc
1141 aagtattata ctcggataac aatgaaaagg atggcacagc ttctggatct atctgttgat
1201 gagtccgaag cctttctctc aaatctagta gttaacaaga ccatctttgc taaagtagac
1261 agattagcag gaattatcaa cttccagaga cccaaggatc caaataattt attaaatgac
1321 tggtctcaga aactgaactc attaatgtct ctggttaaca aaactacgca tctcatagcc
1381 aaagaggaga tgatacataa tctacaataa gggtcttagt gctttagaaa aaagttaaaa
1441 ttggaagtca ttaaaaaaag actgttataa tggtgtatat gttggggttt tttttctaag
1501 cttctttgtc ttaaatttta aaatagtgaa tatgtttgag actccctttg acctttcagt
1561 tccccaagtt cattgttaac tttgcatttg caattggtgc aaaaatacag atttctgtcg
1621 tctgaataca caaaaagttg tgtcataact tacccagata tgtttttcta tcatttgaaa
1681 cctttttagc tactgtttgt tttcattcaa ctaacaaaca tattccaata ataaaagcag
1741 tatatacata aaaaaaaaaa aaaaaaa
//