LOCUS BC018528 1977 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens polymerase (RNA) I polypeptide D, 16kDa, mRNA (cDNA
clone MGC:9850 IMAGE:3865616), complete cds.
ACCESSION BC018528
VERSION BC018528.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1977)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1977)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: d Column: 2
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..1977
/db_xref="H-InvDB:HIT000038358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9850 IMAGE:3865616"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1977
/gene="POLR1D"
/gene_synonym="MGC9850"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
CDS 119..487
/gene="POLR1D"
/gene_synonym="MGC9850"
/gene_synonym="POLR1C"
/gene_synonym="RPA16"
/gene_synonym="RPA9"
/gene_synonym="RPAC2"
/gene_synonym="RPO1-3"
/codon_start=1
/product="polymerase (RNA) I polypeptide D, 16kDa"
/protein_id="AAH18528.1"
/db_xref="GeneID:51082"
/db_xref="HGNC:HGNC:20422"
/translation="MEEDQELERKAIEELLKEAKRGKTRAETMGPMGWMKCPLASTNK
RFLINTIKNTLPSHKEQDHEQKEGDKEPAKSQAQKEENPKKHRSHPYKHSFRARGSAS
YSPPRKRSSQDKYEKRSNRR"
BASE COUNT 608 a 439 c 392 g 538 t
ORIGIN
1 gtcctccgcg ccttccgtcg gtcggtcctt ccttcctgct tcgcctccgc gcctcgcgct
61 atgggacaga gcccccgatc cgccagcacc acctgaggat ccagaaaccg ccccagcgat
121 ggaagaggat caggagctgg agaggaaagc aatagaagaa ctgcttaagg aggcaaaacg
181 tgggaaaact agagctgaaa caatgggacc catgggttgg atgaagtgtc ctcttgctag
241 caccaataaa agatttctaa ttaacacaat taaaaacaca ttgccctctc ataaagagca
301 agaccatgaa caaaaagagg gcgataagga accagcgaag agccaggccc agaaagaaga
361 aaacccgaag aaacacagaa gccatcctta caagcacagc ttccgcgctc gaggttccgc
421 cagttactcc ccgccacgaa agcggagcag ccaggacaag tacgaaaagc ggtccaaccg
481 gcggtgaggc tggaaccagg gccagccagc cctgcgggcc tccgtgctcc ttcggggtgc
541 ggtgtgcgga gaaggcctga gctggcaggg caaacacctg agagtgactt tgacattagg
601 tcctttgttg tttttaaaga ggctgctggc cacaggcaaa aaaaatgacc tagcaactct
661 tgaggaaaca agtgcaaagg aggatgtctt ggcaagttta agctacttct gcagtgtagt
721 agacttacat attgttgttt atcttgtttg gaagtgtgtt tcaaaataaa catgtctaga
781 atttaaagtt ttcagagatt gttaaaactg gttccaattt tttggtcatt tctcagaaaa
841 ataaaatact tataaatcct atattttact ttttgggggt attacattta aaatttagaa
901 atcatcagtc cagtgaccat atttatgaaa agctgtagcc ctccaaggtc tgggaattta
961 tcgagaagct ctttgatagc tctgcatttg ttttccctta ggtgaacaat gtaggaaatc
1021 ctcaaagtgg ctttgaattt aatgctccac ttcagttacc agaggttaaa aatgggtttt
1081 gttgtttcct gtgcattctc aaactcattt attagataga acaatctttc tatatttaat
1141 ttttttaata tataggtctt aagtggtgct ttaaaaagaa ccctcacaag ttaaaaatta
1201 agagttgttt cagtgctaga tcttgccagc taaagacttg tgataccact atatagtata
1261 gttgttccag aaatcttcat tttaaataga agtgtttaca atgccttttt tcccccagta
1321 ttggttttca atacctgttt tcatatacaa ttacaaacct ttcaaacctg tattccttct
1381 ttatactcag gaaaatgtca ccaagcaccc tcctccccag ttcacaaaag gaagaagatg
1441 aagattctgt ctccctgttc cccctcccca gttttccaaa gtgtctgagc atatgcctgg
1501 ctgtcctcag atcatcacca tgccacatcc ctgctcccta cttcctggca gccaagaaaa
1561 gccctttcta catgctagaa ggaaatacat ccaaaaagtt agcattggag tgttagaaac
1621 tagaatagac ctctccgcca ccgagctgct gtgtcacgcc ctcagcctgc tagggagtga
1681 caagcccaag tcattcttga tccacccctt ctcccacccc agatcccagg gactcatcct
1741 gtgactttgt aaccacactc attcctttca aacacagagg aggaattatt gcttcatctg
1801 actttattca aatctagtta tgtattggcc taaattattt gtgcaaaatt tgaaatgttt
1861 tttatttaaa tattagaaat agcacaaagt catggagttt ttaaaaattg ttataattaa
1921 gtaaaaataa agctgaattg tgtcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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