LOCUS BC017474 1365 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase, mRNA (cDNA
clone MGC:15153 IMAGE:3544703), complete cds.
ACCESSION BC017474
VERSION BC017474.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1365)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1365)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45643118.
FEATURES Location/Qualifiers
source 1..1365
/db_xref="H-InvDB:HIT000089312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15153 IMAGE:3544703"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1365
/gene="PECI"
/gene_synonym="ACBD2"
/gene_synonym="dJ1013A10.3"
/gene_synonym="DRS1"
/gene_synonym="HCA88"
/db_xref="GeneID:10455"
/db_xref="HGNC:HGNC:14601"
/db_xref="MIM:608024"
CDS 82..1176
/gene="PECI"
/gene_synonym="ACBD2"
/gene_synonym="dJ1013A10.3"
/gene_synonym="DRS1"
/gene_synonym="HCA88"
/codon_start=1
/product="peroxisomal D3,D2-enoyl-CoA isomerase"
/protein_id="AAH17474.1"
/db_xref="GeneID:10455"
/db_xref="HGNC:HGNC:14601"
/db_xref="MIM:608024"
/translation="MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATE
GPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGT
DRKSTGFETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLT
GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVG
ISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKL
TAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVN
AEECNVLQGRWLSDECTNAVVNFLSRKSKL"
BASE COUNT 434 a 272 c 322 g 337 t
ORIGIN
1 gatggcgatg gcgtacttgg cttggagact ggcgcggcgt tcgtgtccga ggtcactagt
61 ttcccggtag ttcagctgca catgaataga acagcaatga gagccagtca gaaggacttt
121 gaaaattcaa tgaatcaagt gaaactcttg aaaaaggatc caggaaacga agtgaagcta
181 aaactctacg cgctatataa gcaggccact gaaggacctt gtaacatgcc caaaccaggt
241 gtatttgact tgatcaacaa ggccaaatgg gacgcatgga atgcccttgg cagcctgccc
301 aaggaagctg ccaggcagaa ctatgtggat ttggtgtcca gtttgagtcc ttcattggaa
361 tcctctagtc aggtggagcc tggaacagac aggaaatcaa ctgggtttga aactctggtg
421 gtgacctccg aagatggcat cacaaagatc atgttcaacc ggcccaaaaa gaaaaatgcc
481 ataaacactg agatgtatca tgaaattatg cgtgcactta aagctgccag caaggatgac
541 tcaatcatca ctgttttaac aggaaatggt gactattaca gtagtgggaa tgatctgact
601 aacttcactg atattccccc tggtggagta gaggagaaag ctaaaaataa tgccgtttta
661 ctgagggaat ttgtgggctg ttttatagat tttcctaagc ctctgattgc agtggtcaat
721 ggtccagctg tgggcatctc cgtcaccctc cttgggctat tcgatgccgt gtatgcatct
781 gacagggcaa catttcatac accatttagt cacctaggcc aaagtccgga aggatgctcc
841 tcttacactt ttccgaagat aatgagccca gccaaggcaa cagagatgct tatttttgga
901 aagaagttaa cagcgggaga ggcatgtgct caaggacttg ttactgaagt tttccctgat
961 agcacttttc agaaagaagt ctggaccagg ctgaaggcat ttgcaaagct tcccccaaat
1021 gccttgagaa tttcaaaaga ggtaatcagg aaaagagaga gagaaaaact acacgctgtt
1081 aatgctgaag aatgcaatgt ccttcaggga agatggctat cagatgaatg cacaaatgct
1141 gtggtgaact tcttatccag aaaatcaaaa ctgtgatgac cactacagca gagtaaagca
1201 tgtccaagga aggatgtgct gttacctctg atttccagta ctggaactaa ataagcttca
1261 ttgtgccttt tgtagtgcta gaatatcaat tacaatgatg atatttcact acagctctga
1321 tgaataaaaa gttttgtaaa acaaaaaaaa aaaaaaaaaa aaaaa
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