LOCUS BC017297 2219 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 49, member B, mRNA
(cDNA clone MGC:29507 IMAGE:5017493), complete cds.
ACCESSION BC017297
VERSION BC017297.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2219)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2219)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC017297.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734437.
FEATURES Location/Qualifiers
source 1..2219
/db_xref="H-InvDB:HIT000089238"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29507 IMAGE:5017493"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2219
/gene="FAM49B"
/gene_synonym="BM-009"
/gene_synonym="L1"
/db_xref="GeneID:51571"
/db_xref="HGNC:HGNC:25216"
CDS 550..1524
/gene="FAM49B"
/gene_synonym="BM-009"
/gene_synonym="L1"
/codon_start=1
/product="family with sequence similarity 49, member B"
/protein_id="AAH17297.1"
/db_xref="GeneID:51571"
/db_xref="HGNC:HGNC:25216"
/translation="MGNLLKVLTCTDLEQGPNFFLDFENAQPTESEKEIYNQVNVVLK
DAEGILEDLQSYRGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFYEFSQRLEA
ALRGLLGALTSTPYSPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAIQNDFSYYR
RTLSRMRINNVPAEGENEVNNELANRMSLFYAEATPMLKTLSDATTKFVSENKNLPIE
NTTDCLSTMASVCRVMLETPEYRSRFTNEETVSFCLRVMVGVIILYDHVHPVGAFAKT
SKIDMKGCIKVLKDQPPNSVEGLLNALRYTTKHLNDETTSKQIKSMLQ"
BASE COUNT 678 a 427 c 476 g 638 t
ORIGIN
1 ggcaggtgtt gaggggctcc cggtccggct gccgccgctc ccccgctccg gacccggggc
61 tccccctagc gccgctgagg agccgcctct gcggctccag gagggcgcag gagcgggact
121 gagagcgcct ggaggctcga gcggagggta attcatttgc acacctgtta gcaagaaaca
181 gaagttgaag gactggaaca agtgaactag gaaagaggga acgccaatcc aaggatagaa
241 ggacaaggac agaatcacca gcactggctg aaggcctcct gtttcctgcg ctttctcctt
301 ttcctgtgaa atctccgagg agaagaaaga atgatggaca gtttatcctt tcactgccac
361 aaggcctgtt tacttggcag taggtcctta agttccttgc ttttttgctg ctgtttggtg
421 actggaagag gcaccagaga ctctcactct ggggaggttt gctggcatgg gtaatctcat
481 taaggtgcta accagggaca tagaccacaa tgcagcacat tttttcttgg actttgaaag
541 taccttaaca tggggaatct tcttaaagtt ttgacatgca cagaccttga gcaggggcca
601 aattttttcc ttgattttga aaatgcccag cctacagagt ctgagaagga aatttataat
661 caggtgaatg tagtattaaa agatgcagaa ggcatcttgg aggacttgca gtcatacaga
721 ggagctggcc acgaaatacg agaggcaatc cagcatccag cagatgagaa gttgcaagag
781 aaggcatggg gtgcagttgt tccactagta ggcaaattaa agaaatttta cgaattttct
841 cagaggttag aagcagcatt aagaggtctt ctgggagcct taacaagtac cccatattct
901 cccacccagc atctagagcg agagcaggct cttgctaaac agtttgcaga aattcttcat
961 ttcacactcc ggtttgatga actcaagatg acaaatcctg ccatacagaa tgatttcagc
1021 tattatagaa gaacattgag tcgtatgagg attaacaatg taccggcaga aggagaaaat
1081 gaagtaaata atgaattggc aaatcgaatg tctttgtttt atgctgaggc aactccaatg
1141 ctgaaaacct tgagtgatgc cacaacaaaa tttgtatcag agaataaaaa tttaccaata
1201 gaaaatacca cagattgttt aagcacaatg gctagtgtat gcagagtcat gctggaaaca
1261 ccggaataca gaagcagatt tacaaatgaa gagacagtgt cattctgctt gagggtaatg
1321 gtgggtgtca taatactcta tgaccacgta catccagtgg gagcatttgc taaaacttcc
1381 aaaattgata tgaaaggttg tatcaaagtt cttaaggacc aacctcctaa tagtgtggaa
1441 ggtcttctaa atgctctcag gtacacaaca aaacatttga atgatgagac tacctccaag
1501 caaattaaat ccatgctgca ataacaattc tggaataagc acctgctgta gacagaagac
1561 agtattctgc aatgactgag aatgcagttt tttagtgatt gcaattacta tctcatttat
1621 tcttgctttt atttctttcc tctgttcctc ttccctcttt tttaatcatg ttcttaagac
1681 ttcttttctg tgccaaaatc agtaaagtta cactctgaag ggatatcatc ctttcaaacg
1741 ggccatctaa ggcagctaat tatgcattgc attggggtct ctactgagaa aaattctgtg
1801 acttgaacta aatattttta aatgtggatt ttttttgaaa ctaatattta atattgcttc
1861 tcctgcatgg caaaactgcc tattctgcta tttaaaaacc ctcaatgact ttattttcta
1921 ctgccgcctt tttcatgtgc aaccaaaatg aaaatgttta aattaactgt gttgtacaaa
1981 tggtacccaa cacaaacttt ttttaaatta gtaatacttt tgtttaaagt tttaagtttg
2041 cattttgact ttttttgtaa ggatgtatgt tgtgtgttta acctttatta actaacgtta
2101 aaagctgtga tgtgtgcgta gaatattacg tatgcatgtt catgtctaaa gaatggctgt
2161 tgatgataaa ataaaaatca gctttcattt ttctaaaaaa aaaaaaaaaa aaaaaaaaa
//