LOCUS BC017198 1029 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type,
10, mRNA (cDNA clone MGC:1665 IMAGE:3143189), complete cds.
ACCESSION BC017198
VERSION BC017198.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1029)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1029)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110923.
FEATURES Location/Qualifiers
source 1..1029
/db_xref="H-InvDB:HIT000037868"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1665 IMAGE:3143189"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1029
/gene="PSMB10"
/gene_synonym="LMP10"
/gene_synonym="MGC1665"
/db_xref="GeneID:5699"
/db_xref="HGNC:HGNC:9538"
/db_xref="MIM:176847"
CDS 80..901
/gene="PSMB10"
/gene_synonym="LMP10"
/gene_synonym="MGC1665"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 10"
/protein_id="AAH17198.1"
/db_xref="GeneID:5699"
/db_xref="HGNC:HGNC:9538"
/db_xref="MIM:176847"
/translation="MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAG
LVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKM
ELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSR
LPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVIT
KTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE"
BASE COUNT 268 a 298 c 294 g 169 t
ORIGIN
1 ctttttagct gctcactggc cccgcttgtc tggccgactc atccgcccgc gacccctaat
61 cccctctgcc tgccccaaga tgctgaagcc agccctggag ccccgagggg gcttctcctt
121 cgagaactgc caaagaaatg catcattgga acgcgtcctc ccggggctca aggtccctca
181 cgcacgcaag accgggacca ccatcgcggg cctggtgttc caagacgggg tcattctggg
241 cgccgatacg cgagccacta acgattcggt cgtggcggac aagagctgcg agaagatcca
301 cttcatcgcc cccaaaatct actgctgtgg ggctggagta gccgcggacg ccgagatgac
361 cacacggatg gtggcgtcca agatggagct acacgcgcta tctacgggcc gcgagccccg
421 cgtggccacg gtcactcgca tcctgcgcca gacgctcttc aggtaccagg gccacgtggg
481 tgcatcgctg atcgtgggcg gcgtagacct gactggaccg cagctctacg gtgtgcatcc
541 ccatggctcc tacagccgtc tgcccttcac agccctgggc tctggtcagg acgcggccct
601 ggcggtgcta gaagaccggt tccagccgaa catgacgctg gaggctgctc aggggctgct
661 ggtggaagcc gtcaccgccg ggatcttggg tgacctgggc tccgggggca atgtggacgc
721 atgtgtgatc acaaagactg gcgccaagct gctgcggaca ctgagctcac ccacagagcc
781 cgtgaagagg tctggccgct accactttgt gcctggaacc acagctgtcc tgacccagac
841 agtgaagcca ctaaccctgg agctagtgga ggaaactgtg caggctatgg aggtggagta
901 agctgaggct tagagcttgg aacaaggggg aataaaccca gaaaatacag ttaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaa
//