LOCUS BC017019 1288 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens unc-50 homolog (C. elegans), mRNA (cDNA clone MGC:8957
IMAGE:3888349), complete cds.
ACCESSION BC017019
VERSION BC017019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1288)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432047.
FEATURES Location/Qualifiers
source 1..1288
/db_xref="H-InvDB:HIT000037789"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8957 IMAGE:3888349"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1288
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="UNCL"
/gene_synonym="URP"
/db_xref="GeneID:25972"
CDS 286..1065
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="UNCL"
/gene_synonym="URP"
/codon_start=1
/product="UNC50 protein"
/protein_id="AAH17019.1"
/db_xref="GeneID:25972"
/translation="MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQM
DFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFV
LDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVH
LNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPF
LKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRVK"
misc_feature 412..1053
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="UNCL"
/gene_synonym="URP"
/note="UNC-50; Region: UNC-50 family. This family contains
several eukaryotic transmembrane proteins which are
related to the C. elegans protein UNC-50"
/db_xref="CDD:pfam05216"
BASE COUNT 375 a 234 c 276 g 403 t
ORIGIN
1 ggcccctcgg ccggcgatag agttgcggct aaaatgaaag gacgcccagt tacatttgca
61 tcgtagataa agaaagagca tttagtataa gcatgtccga aatgttgcgt gggatgtagg
121 catactaaaa ccttattcgt ggcctgtctg aaatccaaat ggagctgggg ttgggaagaa
181 catggaaagt gacctccctg ccaaataact cagaagagga gtgtcggtag ccaaaagttt
241 cttcagaata cgtgtaaaag aaatgttttt cttccatcta ggaagatgtt accgagtact
301 tcagtgaatt ccttagtgca ggggaacgga gtcttgaatt ccagggatgc ggcaagacac
361 acagccggag cgaaacgcta caaatatctg agaaggcttt tccgctttcg gcaaatggac
421 tttgaatttg ctgcctggca gatgctctac ctgttcacat ccccacagag agtttacaga
481 aattttcatt atcgaaaaca gacgaaggac cagtgggcca gagatgaccc tgctttcttg
541 gtcctgttaa gtatctggct ctgtgtgtcc actataggat ttggctttgt gctggacatg
601 ggattctttg agacaataaa gcttctcctt tgggttgtac tcatagattg tgtaggcgtt
661 ggtcttctga tagcaacttt aatgtggttc atctctaaca agtatttagt gaaacgacag
721 agcagagact atgatgtgga atggggctat gcttttgatg tgcatctcaa tgctttttat
781 ccactcctgg tcattttgca ttttatccag ctttttttca tcaaccatgt tatcctgaca
841 gacacattta ttggatattt agttggaaat accttatggt tggttgcagt tggctattat
901 atctatgtaa ctttcctggg atacagtgca ttgccatttt tgaaaaatac agtaattctt
961 ctgtatccat ttgcacctct gattctgctc tacgggcttt ccctggcact gggatggaac
1021 ttcacccata ctctctgttc tttctataag tacagagtga aataaaaagt gagaagaaga
1081 ttcaatcgta actgtgtcaa cagtattgtg aagtgatcat ttcttgtaaa acttgtaaat
1141 aaactatcat ctttgtagat atcttaaagg tgtaaagttt gcaaatttga agaaatatat
1201 attaacactg tggtcaggta cattccttaa aactaattaa atgtacattt ctataataaa
1261 tattttttaa actaaaaaaa aaaaaaaa
//