LOCUS BC016727 1535 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 2,
mRNA (cDNA clone MGC:24459 IMAGE:4081330), complete cds.
ACCESSION BC016727
VERSION BC016727.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: k Column: 20.
FEATURES Location/Qualifiers
source 1..1535
/db_xref="H-InvDB:HIT000037654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24459 IMAGE:4081330"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1535
/gene="PTPN2"
/gene_synonym="TC-PTP"
/gene_synonym="TCELLPTP"
/gene_synonym="TCPTP"
/db_xref="GeneID:5771"
/db_xref="HGNC:HGNC:9650"
/db_xref="MIM:176887"
CDS 107..1168
/gene="PTPN2"
/gene_synonym="TC-PTP"
/gene_synonym="TCELLPTP"
/gene_synonym="TCPTP"
/codon_start=1
/product="protein tyrosine phosphatase, non-receptor type
2"
/protein_id="AAH16727.1"
/db_xref="GeneID:5771"
/db_xref="HGNC:HGNC:9650"
/db_xref="MIM:176887"
/translation="MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRN
RNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVW
QQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQ
LENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSA
GIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGA
KCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLS
SKMQDTMEENSERPRLTDT"
BASE COUNT 503 a 310 c 337 g 385 t
ORIGIN
1 gggggagcgc gcatgcgccg cagcgccagc gctctccccg gatcgtgcgg ggcctgagcc
61 tctccgccgg cgcaggctct gctcgcgcca gctcgctccc gcagccatgc ccaccaccat
121 cgagcgggag ttcgaagagt tggatactca gcgtcgctgg cagccgctgt acttggaaat
181 tcgaaatgag tcccatgact atcctcatag agtggccaag tttccagaaa acagaaatcg
241 aaacagatac agagatgtaa gcccatatga tcacagtcgt gttaaactgc aaaatgctga
301 gaatgattat attaatgcca gtttagttga catagaagag gcacaaagga gttacatctt
361 aacacagggt ccacttccta acacatgctg ccatttctgg cttatggttt ggcagcagaa
421 gaccaaagca gttgtcatgc tgaaccgcat tgtggagaaa gaatcggtta aatgtgcaca
481 gtactggcca acagatgacc aagagatgct gtttaaagaa acaggattca gtgtgaagct
541 cttgtcagaa gatgtgaagt cgtattatac agtacatcta ctacaattag aaaatatcaa
601 tagtggtgaa accagaacaa tatctcactt tcattatact acctggccag attttggagt
661 ccctgaatca ccagcttcat ttctcaattt cttgtttaaa gtgagagaat ctggctcctt
721 gaaccctgac catgggcctg cggtgatcca ctgtagtgca ggcattgggc gctctggcac
781 cttctctctg gtagacactt gtcttgtttt gatggaaaaa ggagatgata ttaacataaa
841 acaagtgtta ctgaacatga gaaaataccg aatgggtctt attcagaccc cagatcaact
901 gagattctca tacatggcta taatagaagg agcaaaatgt ataaagggag attctagtat
961 acagaaacga tggaaagaac tttctaagga agacttatct cctgcctttg atcattcacc
1021 aaacaaaata atgactgaaa aatacaatgg gaacagaata ggtctagaag aagaaaaact
1081 gacaggtgac cgatgtacag gactttcctc taaaatgcaa gatacaatgg aggagaacag
1141 tgagaggcca agattgacag acacctaata ttcatgactt gagaatattc tgcagctata
1201 aattttgaac cattgatgtg caaagcaaga cctgaagccc actccggaaa ctaaagtgag
1261 gctcgctaac cctctagatt gcctcacagt tgtttgttta caaagtaaac tttacatcca
1321 ggggatgaag agcacccacc agcagaagac tttgcagaac ctttaattgg atgtgttaag
1381 tgtttttaat gagtgtatga aatgtagaaa gatgtacaag aaataaatta ggagagatta
1441 ctttgtattg tactgccatt cctactgtat ttttatactt tttggcagca ttaaatattt
1501 ttgctaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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