LOCUS BC016639 2279 bp mRNA linear HUM 02-MAR-2004 DEFINITION Homo sapiens amine oxidase (flavin containing) domain 2, mRNA (cDNA clone IMAGE:3917412), partial cds. ACCESSION BC016639 VERSION BC016639.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2279) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2279) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: a Column: 3. FEATURES Location/Qualifiers source 1..2279 /db_xref="H-InvDB:HIT000089016" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3917412" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2279 /gene="AOF2" /gene_synonym="BHC110" /gene_synonym="KIAA0601" /db_xref="GeneID:23028" CDS <1..1947 /gene="AOF2" /gene_synonym="BHC110" /gene_synonym="KIAA0601" /codon_start=1 /product="AOF2 protein" /protein_id="AAH16639.1" /db_xref="GeneID:23028" /translation="QTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVL VHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTL LEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYE ANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKH VKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLV KSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEF ANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYT ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRM GFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAA GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSG NDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGVLLSGLREAGRIADQ FLGAMYTLPRQATPGVPAQQSPSM" misc_feature 4..180 /gene="AOF2" /gene_synonym="BHC110" /gene_synonym="KIAA0601" /note="SWIRM; Region: SWIRM domain. This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. This domain is predicted to be a protein-protein interaction unit" /db_xref="CDD:pfam04433" misc_feature 259..666 /gene="AOF2" /gene_synonym="BHC110" /gene_synonym="KIAA0601" /note="Amino_oxidase; Region: Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation" /db_xref="CDD:pfam01593" misc_feature 958..1863 /gene="AOF2" /gene_synonym="BHC110" /gene_synonym="KIAA0601" /note="Amino_oxidase; Region: Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation" /db_xref="CDD:pfam01593" BASE COUNT 650 a 490 c 552 g 587 t ORIGIN 1 cagacccaga aggtttttct tttcattaga aaccgcacac tgcagttgtg gttggataat 61 ccaaagattc agctgacatt tgaggctact ctccaacaat tagaagcacc ttataacagt 121 gatactgtgc ttgtccaccg agttcacagt tatttagagc gtcatggtct tatcaacttc 181 ggcatctata agaggataaa acccctacca actaaaaaga caggaaaggt aattattata 241 ggctctgggg tctcaggctt ggcagcagct cgacagttac aaagttttgg aatggatgtc 301 acacttttgg aagccaggga tcgtgtgggt ggacgagttg ccacatttcg caaaggaaac 361 tatgtagctg atcttggagc catggtggta acaggtcttg gagggaatcc tatggctgtg 421 gtcagcaaac aagtaaatat ggaactggcc aagatcaagc aaaaatgccc actttatgaa 481 gccaacggac aagctgttcc taaagagaaa gatgaaatgg tagagcaaga gtttaaccgg 541 ttgctagaag ctacatctta ccttagtcat caactagact tcaatgtcct caataataag 601 cctgtgtccc ttggccaggc attggaagtt gtcattcagt tacaagagaa gcatgtcaaa 661 gatgagcaga ttgaacattg gaagaagata gtgaaaactc aggaagaatt gaaagaactt 721 cttaataaga tggtaaattt gaaagagaaa attaaagaac tccatcagca atacaaagaa 781 gcatctgaag taaagccacc cagagatatt actgccgagt tcttagtgaa aagcaaacac 841 agggatctga ccgccctatg caaggaatat gatgaattag ctgaaacaca aggaaagcta 901 gaagaaaaac ttcaggagtt ggaagcgaat cccccaagtg atgtatatct ctcatcaaga 961 gacagacaaa tacttgattg gcattttgca aatcttgaat ttgctaatgc cacacctctc 1021 tcaactctct cccttaagca ctgggatcag gatgatgact ttgagttcac tggcagccac 1081 ctgacagtaa ggaatggcta ctcgtgtgtg cctgtggctt tagcagaagg cctagacatt 1141 aaactgaata cagcagtgcg acaggttcgc tacacggctt caggatgtga agtgatagct 1201 gtgaataccc gctccacgag tcaaaccttt atttataaat gcgacgcagt tctctgtacc 1261 cttcccctgg gtgtgctgaa gcagcagcca ccagccgttc agtttgtgcc acctctccct 1321 gagtggaaaa catctgcagt ccaaaggatg ggatttggca accttaacaa ggtggtgttg 1381 tgttttgatc gggtgttctg ggatccaagt gtcaatttgt tcgggcatgt tggcagtacg 1441 actgccagca ggggtgagct cttcctcttc tggaacctct ataaagctcc aatactgttg 1501 gcactagtgg caggagaagc tgctggtatc atggaaaaca taagtgacga tgtgattgtt 1561 ggccgatgcc tggccattct caaagggatt tttggtagca gtgcagtacc tcagcccaaa 1621 gaaactgtgg tgtctcgttg gcgtgctgat ccctgggctc ggggctctta ttcctatgtt 1681 gctgcaggat catctggaaa tgactatgat ttaatggctc agccaatcac tcctggcccc 1741 tcgattccag gtgccccaca gccgattcca cgactcttct ttgcgggaga acatacgatc 1801 cgtaactacc cagccacagt gcatggtgtt ctgctgagtg ggctgcgaga agcgggaaga 1861 attgcagacc agtttttggg ggccatgtat acgctgcctc gccaggccac accaggtgtt 1921 cctgcacagc agtccccaag catgtgagac agatgcattc taagggaaga ggcccatgtg 1981 cctgtttctg ccatgtaagg aaggctcttc tagcaatact agatcccact gagaaaatcc 2041 accctggcat ctgggctcct gatcagctga tggagctcct gatttgacaa aggagcttgc 2101 ctcctttgaa tgacctagag cacagggagg aacttgtcca ttagtttgga attgtgttct 2161 tcgtaaagac tgaggcaagc aagtgctgtg aaataacatc atcttagtcc cttggtgtgt 2221 ggggtttgtt ttttttttta tattttgaga ataaaacttc atataaaaaa aaaaaaaaa //