LOCUS BC015937 1965 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens poly(A) binding protein interacting protein 1, mRNA
(cDNA clone MGC:9141 IMAGE:3922262), complete cds.
ACCESSION BC015937
VERSION BC015937.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1965)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1965)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015937.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452727.
FEATURES Location/Qualifiers
source 1..1965
/db_xref="H-InvDB:HIT000037411"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9141 IMAGE:3922262"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1965
/gene="PAIP1"
/gene_synonym="MGC12360"
/db_xref="GeneID:10605"
/db_xref="HGNC:HGNC:16945"
/db_xref="MIM:605184"
CDS 234..1673
/gene="PAIP1"
/gene_synonym="MGC12360"
/codon_start=1
/product="poly(A) binding protein interacting protein 1"
/protein_id="AAH15937.1"
/db_xref="GeneID:10605"
/db_xref="HGNC:HGNC:16945"
/db_xref="MIM:605184"
/translation="MSDGFDRAPGAGRGRSRGLGRGGGGPEGGGFPNGAGPAERARHQ
PPQPKAPGFLQPPPLRQPRTTPPPGAQCEVPASPQRPSRPGALPEQTRPLRAPPSSQD
KIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSE
YVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG
ARLCNYLSHHLTISPQSGNFCQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGE
LYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAW
KEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPE
NDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPY
LDDIDDEMDPEIEEAYEKFCLESERKRKQ"
BASE COUNT 552 a 436 c 502 g 475 t
ORIGIN
1 ctggaaagcc gagggtagcc gagcggggcg ggcgctctgg agcggcgggt gctcgggctg
61 ccgtccgctc cgccagaagc accgagcagc cgagccgggg cccgccgccc tcctcctcca
121 tgaggcccga gtgaggcgcg gcggctatag ccgacccgcg gcgccttccc cccgcgtcct
181 atcgcgagcg cagcggcagc ggcccctgga ggaggaggcg gaggaggagg agcatgtcgg
241 acggtttcga tcgggcccca ggtgctggtc ggggccggag ccggggcctg ggccgcggag
301 ggggcgggcc tgagggcggc ggtttcccga acggagcggg gcctgctgag cgggcgcggc
361 accagccgcc gcaacccaaa gccccgggct tcctgcagcc accgccgctg cgccagccca
421 ggacgacccc gccgccaggg gcccagtgcg aggtccccgc cagcccccag cggccttccc
481 ggcccggggc gctcccagag caaacgaggc ccctgagagc tccacctagt tcacaggata
541 aaatcccaca gcagaactcg gagtcagcaa tggctaagcc ccaggtggtt gtagctcctg
601 tattaatgtc taagctgtct gtgaatgccc ctgaatttta cccttcaggt tattcttcca
661 gttacacaga atcctatgag gatggttgtg aggattatcc tactctatca gaatatgttc
721 aggatttttt gaatcatctt acagagcagc ctggcagttt tgaaactgaa attgaacagt
781 ttgcagagac cctgaatggt tgtgttacaa cagatgatgc tttgcaagaa cttgtggaac
841 tcatctatca acaggccaca tctatcccaa atttctctta tatgggagct cgcctgtgta
901 attacctgtc ccatcatctg acaattagcc cacagagtgg caacttctgc caattgctac
961 ttcaaagatg tcggactgaa tatgaagtta aagatcaagc tgcaaaaggg gatgaagtta
1021 ctcgaaaacg atttcatgca tttgtactct ttctgggaga actttatctt aacctggaga
1081 tcaagggaac aaatggacag gttacaagag cagatattct tcaggttggt cttcgagaat
1141 tgctgaatgc cctgttttct aatcctatgg atgacaattt aatttgtgca gtaaaattgt
1201 taaagttgac aggatcagtt ttggaagatg cttggaagga aaaaggaaag atggatatgg
1261 aagaaattat tcagagaatt gaaaacgttg tcctagatgc aaactgcagt agagatgtaa
1321 aacagatgct cttgaagctt gtagaactcc ggtcaagtaa ctggggcaga gtccatgcaa
1381 cttcaacata tagagaagca acaccagaaa atgatcctaa ctactttatg aatgaaccaa
1441 cattttatac atctgatggt gttcctttca ctgcagctga tccagattac caagagaaat
1501 accaagaatt acttgaaaga gaggactttt ttccagatta tgaagaaaat ggaacagatt
1561 tatccggggc tggtgatcca tacttggatg atattgatga tgagatggac ccagagatag
1621 aagaagctta tgaaaagttt tgtttggaat cagagcgtaa gcgaaaacag taaagttaaa
1681 tttcagcata tcagttttat aaagcagttt aggtatggtg atttagcaga acacaagaga
1741 gcaagaaaat gtgtcacatc tataccaaat tgaggatgtt gagttatgtt actaatgtat
1801 gcaactttaa ttttgtttaa cactatctgc caaaataaac tttattccct ataacttaaa
1861 atgtgtatat atatataata gtttattatg tacagttaat tctactgttt tggctgcaat
1921 aaaatcgatt ttgaaataaa tgaaatgttg aaaaaaaaaa aaaaa
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