LOCUS BC015824 1995 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens SYF2 homolog, RNA splicing factor (S. cerevisiae),
mRNA (cDNA clone IMAGE:4042910), with apparent retained intron.
ACCESSION BC015824
VERSION BC015824.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1995)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1995)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46371996
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1995
/db_xref="H-InvDB:HIT000088815"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4042910"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 614 a 431 c 480 g 470 t
ORIGIN
1 ggggcttgtt gccggaagtg ggaagagaga aaggttgtga tggcggctat agctgcatcc
61 gaggtgctgg tggacagcgc ggaggagggg tccctcgctg cggcggcgga gctggccgct
121 cagaagcgcg aacagagact gcgcaaattc cgggagctgc acctgatgcg ggtgagtagt
181 cttggaggcc ggcttagatc cgtcatctgg ccaagcctgt gcgcttttgt agaggggacg
241 aggaagccac accactgcgt ctgacagacc aacagagcag gatcatctga gaggaaagct
301 ctgttcggtg gtactcaacc ctggcagcac attgggatca ttctgagaac atttgaaaat
361 ataactgttc actccagccc ctctcccacc cacatccaat ttaatgtatc tgggttaggt
421 ttgggagtct ccattactaa caacctccct gctccgtgat tccaacaaat tcttcatttt
481 acctagggaa atatgtagag ctagagacag gaagaaactt gtctagtgtc agtaagagac
541 ctggttcact ttaaaaaata ataatcttct gtcagaatct gtttgagtga aaagaaaata
601 atcatctgtt tttgggactt ctgggggaaa agaataaaaa gaaaataaaa aaaatggcaa
661 acttttgaaa gtctacagtg tggtagttca gccagttgat agggaatctg atgtttaagt
721 gccctggagg tgcagaggag gagagaggaa tgcagtttgt gggtctccag ggggtgcctc
781 atgtagtagg tgacacctaa actactgttt gaaagccaga caactaaagg agttagagaa
841 agagatatcc aagcaaaggg aacaaattca aagaaagaga atttgtatta gggataagag
901 tccagcaaat agcttgctgc agttggagca gagaaagaga aaagcagccc ctgtttcacc
961 atggagtgac ctgacagcta ggccatggtt tcacaaaatc ccaaaatcac tctgactgtt
1021 gtagtgagac aaaacaaaga agacttttca aattacaaga atgaccacat atttctttct
1081 tctgactaac accagtgact gttattaaca aatacagcat tagtctcact ccgttacttc
1141 tgcctcctat ataaaaatgt aagatactgg gccgggtgcg gtggctcacg cctgtaatcc
1201 cagcactttg ggaggccgag gagggcggat cacaaggtca ggagatcaag accatcctgg
1261 ctaacacggt gaaaccccgt ctctactaaa aatagaaaaa attagccggg cgtgctggcg
1321 ggctacacgg gaggctgagg caggagaatg gcatgagccc gagagtcgga gcttacagtg
1381 agtcgagatc acaccactgc actccagcct gggcgacaga gcgagactcc atctcaaaaa
1441 aaaaaaaaaa aaaaaatcta agatacctaa ttgtagaaag cccctgcttt ctgacagtac
1501 ccaatccaca tccttaaccc tcccctcagt cacctgatac aaacccaaat cctggaacaa
1561 gcccttccta acaccctgtc actcaaatgc ccacggttcc ccgtggtttg ctctcttctg
1621 tgcaacagac tcaactttgt tgaccgtagg tatgttcttg gcgtctttaa ttgcagggct
1681 tttccagggc caagaatata ctagggatgg tagttgggag gagtatctct ctttgccgag
1741 ggaaagttaa tctaataaac aattaaaaag acatgcttaa atatttagag tgattgtgta
1801 aggaacacat gtctggaaat taggaggcgg ggcttcctgg acaaactgcc accagcttat
1861 gacctaagga atgtctaact caagttttcc ttaagacgat acactcattt tgctttatgc
1921 aattaagttt atttaaaaat agactcttct ccctgctacc ccagctcaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaa
//