LOCUS BC015050 1249 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Opa interacting protein 5, mRNA (cDNA clone MGC:9610
IMAGE:3908972), complete cds.
ACCESSION BC015050
VERSION BC015050.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: e Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307928.
FEATURES Location/Qualifiers
source 1..1249
/db_xref="H-InvDB:HIT000036984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9610 IMAGE:3908972"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1249
/gene="OIP5"
/gene_synonym="5730547N13Rik"
/db_xref="GeneID:11339"
/db_xref="HGNC:HGNC:20300"
/db_xref="MIM:606020"
CDS 61..750
/gene="OIP5"
/gene_synonym="5730547N13Rik"
/codon_start=1
/product="Opa interacting protein 5"
/protein_id="AAH15050.1"
/db_xref="GeneID:11339"
/db_xref="HGNC:HGNC:20300"
/db_xref="MIM:606020"
/translation="MAAQPLRHRSRCATPPRGDFCGGTERAIDQASFTTSMEWDTQVV
KGSSPLGPAGLGAEEPAAGPQLPSWLQPERCAVFQCAQCHAVLADSVHLAWDLSRSLG
AVVFSRVTNNVVLEAPFLVGIEGSLKGSTYNLLFCGSCGIPVGFHLYSTHAALAALRG
HFCLSSDKMVCYLLKTKAIVNASEMDIQNVPLSEKIAELKEKIVLTHNRLKSLMKILS
EVTPDQSKPEN"
BASE COUNT 313 a 267 c 311 g 358 t
ORIGIN
1 gagctgtgct tggggcgggg cctggcgtgt attcgaaagg aaggcgccgg ctgcgggaag
61 atggcggctc agccgctgcg gcatcgctca cgttgtgcaa cgccgccccg gggggacttt
121 tgtggtggca ctgagagggc gattgaccaa gcttctttta cgacctccat ggagtgggat
181 acgcaggtgg tgaaggggtc ctcgccgctc ggccccgcag ggctgggggc tgaggagcca
241 gccgccggcc cgcagctgcc gtcttggctg cagcctgaga ggtgcgctgt gttccagtgc
301 gcacagtgtc acgcagtgct cgccgactcg gtgcacctcg cctgggacct gtcgcggtcc
361 ctcggggccg tggtcttctc cagagttaca aataacgtcg ttttggaagc gcccttccta
421 gttggcattg aaggttcact caaaggcagt acttacaacc ttttattctg tggttcttgt
481 gggattcccg ttggtttcca tctgtattct acccatgctg ccctggctgc cttgagaggt
541 cacttctgcc tttccagtga caaaatggtg tgctatctct taaaaacaaa agccatagta
601 aatgcatcag agatggatat tcaaaatgtt cctctatcag aaaagattgc agagctgaaa
661 gagaagatag tgctaacgca caatcgctta aaatcactaa tgaagattct gagtgaagtg
721 actcctgacc agtccaagcc agaaaactga tcctgtacca aagcttgagt gtcaggttca
781 ggctttattg ctgtcttcaa caacaggtgc tgcttagtca tttcttgaaa aagattggct
841 tcaagaatgg aggggaaatg cagtttctat ttacctttag gctgattttc caaattattt
901 gtgaagctgt ttttagaaga tgagagacta aggattcttc tcttttatag ctatttgcct
961 taagaactta ctttagattc ttattgaatt cataatactt atctctgaaa atgtctttga
1021 ctgtaaattt aggaattaag atgcagagtc ccatgtgtcc tctgatctaa agttgcatgg
1081 ttggtctgaa aatagagttg ggcttaatgt tgacttctat tactcctgca tggagcagtt
1141 gttatgaata ctaatacatc actttttaac ttctgtaaaa tacagatcat aatattctat
1201 aggtaatgtt taataaattg cctgaataat atacaaaaaa aaaaaaaaa
//