LOCUS BC015046 3507 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 7
(putative), mRNA (cDNA clone MGC:9518 IMAGE:3908032), complete cds.
ACCESSION BC015046
VERSION BC015046.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3507)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3507)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: c Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361696.
FEATURES Location/Qualifiers
source 1..3507
/db_xref="H-InvDB:HIT000036981"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9518 IMAGE:3908032"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3507
/gene="UBR7"
/db_xref="GeneID:55148"
/db_xref="HGNC:HGNC:20344"
CDS 489..1313
/gene="UBR7"
/codon_start=1
/product="ubiquitin protein ligase E3 component n-recognin
7 (putative)"
/protein_id="AAH15046.1"
/db_xref="GeneID:55148"
/db_xref="HGNC:HGNC:20344"
/translation="MIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAY
AAQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKV
EQNSEPCAGSSSESDLQTVFKNESLNAESKSGCKLQELKAKQLIKKDTATYWPLNWRS
KLCTCQDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQATDRSDPLMDTLSSMNRVQQ
VELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGMQYYCS"
BASE COUNT 954 a 728 c 823 g 1002 t
ORIGIN
1 ccggggccga gccgctgttc ggctgacagt tgaggatggc cggagccgag ggcgccgctg
61 ggcggcagtc ggagctggag cccgtggtat cgttggtcga cgtccttgag gaggacgagg
121 agctggagaa tgaggcgtgc gctgtcctgg gcggcagcga ctccgagaag tgctcctact
181 ctcagggctc agtaaagaga caagcactat atgcctgtag tacctgcacc ccagagggag
241 aagaaccagc aggaatttgt ttagcttgca gttatgaatg tcatggaagt cacaaactat
301 ttgagctata cacaaaaaga aattttcgtt gtgattgtgg aaacagcaag tttaaaaatt
361 tggaatgcaa attacttcct gacaaagcaa aggtaaattc tggcaataag tacaatgaca
421 acttttttgg attgtactgc atttgcaaga gaccttatcc tgatcctgaa gacgagattc
481 cagatgagat gatccagtgc gtagtctgtg aagactggtt ccatggaagg catcttggtg
541 ccattccccc tgagagtggg gattttcagg agatggtatg ccaggcctgc atgaaacgtt
601 gttctttttt gtgggcttat gctgcacaat tggcagtaac caaaatatcc actgaggatg
661 atggattggt gcggaacatt gatggaatag gtgatcagga agttatcaaa cctgaaaatg
721 gagagcatca agatagtacc ctcaaagagg atgttccaga acagggaaag gatgatgtcc
781 gggaggttaa agtagagcag aacagtgaac catgtgccgg ctctagttct gaatctgatc
841 tccagacagt gtttaagaat gaaagcctca acgcagaatc aaaatctggc tgcaaacttc
901 aggagcttaa agctaagcag cttataaaga aagacactgc cacctattgg cccctgaact
961 ggcgtagcaa gttgtgtacc tgccaagact gtatgaaaat gtatggagat ctagatgtct
1021 tattcctgac agatgaatac gacacagttc tggcttatga aaacaaaggg aagattgccc
1081 aggccactga caggagcgat cccctaatgg atacccttag cagcatgaat agagtccagc
1141 aagtggaact catttgtgaa tacaatgatt tgaagactga acttaaagac tatctcaaga
1201 gatttgctga tgaaggcacg gttgttaaga gagaggacat tcagcagttc tttgaagagt
1261 ttcagtcaaa aaagagaaga agagtggatg ggatgcagta ttactgcagc tagagtggag
1321 tatgaagctt tctcattcaa gccaatgaaa atgtgcttcc cattcttgga ataaaagagg
1381 tgtggttcac atttggcccc ctttccgtcc tcctctgttt ggagaggcct cgcgctccct
1441 tcattctctt tagctgcagt agccaccgtg tggatgctga cttcacagcc agcgtcctct
1501 gtgactcagc tgatgcagct cattccacag acttcgccag tgtactccta ctccagtgca
1561 cccagggtta tttgcatagt ttttaagttt gattttgttt tgagaaagca aattggtgtc
1621 ttgtttaatg atctgttatt tcactcccag atgtgtgtgt tttgccacag agctgttgcc
1681 ttccagaacc tcctccgcag gcatcacgga aggctctctt cccgtcacct agaacctcta
1741 caggtcccct cgcccctatg attgtggtgc cttgggtcaa agcttcctca agcctggtct
1801 gctccttctt tcacgtccct gttttctgag gtttggtcat agcttagaaa ggatcttggg
1861 gcttgttttc tctaggccca acctccagag tagccaggac tgatggtttt ctggtctgga
1921 tgtctgtcac aggcggagag attaacagat gacagggttg aggaagcaag cctttgttat
1981 gaattttact aatacagttc aagtgaaatt ttcgttcatg attctattgg cactagaatt
2041 agaatttcag tactgtagtg ctcacagggc ttcctggaga acatttgccc gtatactagt
2101 cccttctctg ctgcctagaa aacagaccgg gtctcacccc tgtgaaatct tggtggttta
2161 cgaagtcctc tggatttctt gatattatca gggatattca taagcatata tcaaaaatgg
2221 acctattttg atattctgtt atgaaaatgt tattagaacc ccaataaatt attatttttc
2281 ccccttgaat ctgctaaaga aaacagatcc tgacttagct tacttgaaat aagcagggca
2341 gggagccctg ttttggaaga gacagactgt ggaagagatt acaaacaagg cccgaggctg
2401 cacgaatgat gagttttgtg tatataatgt taatgtccac cgccacttcc ctaacgacta
2461 tgagatcttt tttttgaaga tcctcatgga aggttgtaca gagccccaca tttgagggga
2521 agtcctttca gttgatatga gatctcttta acacccctca gtctatgtag gaaatgcctt
2581 gtgatacata gagaaccctc agcttctctc tgcctctgga ggaccaaggt ctttcctgac
2641 agtcggagac acaccttgat gtatgttaat aaaagcattt caggctgtgg ggccaccatg
2701 tatattaata ctccttatgt gtccagcatc tgtgtattca ttcgagtgcc caatccctgg
2761 atgagatgaa ctaggcctta taaaaagtca aagcctcaaa gaaatggcac aaccatgttc
2821 ttcggcactc aggctcctaa ttgcagatcc tcacgaaggg tggtatgtgg agctggaagg
2881 tcttgtggcc acaggacatg ctggtgagcc ctgagctggc cttgtgcaga gggctccgtt
2941 caaaggctcg gggtgtcttt gaggttgttt atcaagctgg ggaactcttc caagtctgac
3001 aatgtttcga accctttttg caaggttgca ctattagtat accatcatgt ccggaaaact
3061 tttaatcttc tcaaatatct gatgtaacta ccagaaagtc ccttacttcc tatgaccaat
3121 caggaccaag tcttggaggt gatgtgttac attacgtgca gcacaatagt accgatcagt
3181 taactcagcg ctgaagggct tgttttatga aaggtactat tccttctttc acattaactg
3241 gaaacctctt tttttacctg ttgttcacaa ctagttttct tattgactgt attggactgt
3301 ctcttcttgt agagactgat tttggccaac atattaatgc atgttttatg caaaacacaa
3361 atatgatatt agttgctttt aaggagttct ggcattgtat gtgcattttt gtagaaattg
3421 ttactggact tataattaca tacttaactc tgatcaggtt tctgtaaaat ttaaataaaa
3481 ccaatacaaa ataaaaaaaa aaaaaaa
//