LOCUS BC014923 2265 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone
MGC:17894 IMAGE:3909362), complete cds.
ACCESSION BC014923
VERSION BC014923.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2265)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC014923.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734435.
FEATURES Location/Qualifiers
source 1..2265
/db_xref="H-InvDB:HIT000036902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17894 IMAGE:3909362"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2265
/gene="EFHD2"
/gene_synonym="MGC4342"
/gene_synonym="RP3-467K16.3"
/db_xref="GeneID:79180"
/db_xref="HGNC:HGNC:28670"
CDS 32..754
/gene="EFHD2"
/gene_synonym="MGC4342"
/gene_synonym="RP3-467K16.3"
/codon_start=1
/product="EF-hand domain family, member D2"
/protein_id="AAH14923.1"
/db_xref="GeneID:79180"
/db_xref="HGNC:HGNC:28670"
/translation="MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEA
AEALGSADCELSAKLLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFK
QYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKA
AAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEER
KKQAEEMKQRKAAFKELQSTFK"
BASE COUNT 460 a 703 c 706 g 396 t
ORIGIN
1 cccggccaag gcgagtgccg cgcgggccac catggccacg gacgagctgg ccaccaagct
61 gagccggcgg ctgcagatgg agggcgaggg cggcggcgag accccggagc agcccgggct
121 gaacggggca gcggcggcgg cggcgggggc acccgacgag gcggccgagg cgctgggcag
181 cgcggactgc gagctgagcg ccaagctgct gcggcgcgca gacctcaacc agggcatcgg
241 cgagccccag tcgcccagcc gccgcgtctt caacccctac accgagttca aggagttctc
301 caggaagcag atcaaggaca tggagaagat gttcaagcag tatgatgccg ggcgggacgg
361 cttcatcgac ctgatggagc taaaactcat gatggagaaa cttggggccc ctcagaccca
421 cctgggcctg aaaaacatga tcaaggaggt ggatgaggac tttgacagca agctgagctt
481 ccgggagttc ctcctgatct tccgcaaggc ggcggccggg gagcttcagg aggacagcgg
541 gctgtgcgtg ctggcccgcc tctctgagat cgacgtctcc agtgagggtg tcaagggggc
601 caagagcttc tttgaggcca aggtccaggc catcaacgtg tccagccgct tcgaggagga
661 gatcaaggca gagcaggagg aaaggaagaa gcaggcggag gagatgaagc agcggaaagc
721 ggccttcaag gagctgcagt ccacctttaa gtagcggggg ctgcagccga ccgccctgct
781 ccggccccag tgtggtgggc gagggtggcg catgggaggc cgagcctgaa tccttgcctg
841 tgtctgacgg gaccactact aaaaacctaa aaatatctgt gaatggagca agttcagggg
901 tcttatggag gtggcccggc ccctccccgc tcccttccac tctgcacgag gccgccacac
961 cggcgctggc tccctgcccg gcccggccct ccctggcaat ccctgggctc tcttgcaccc
1021 ctaactgccc cctgcctgct ccggcactgc cccaggccca gctcctggcc ctaggtccct
1081 cccagcccca tgtgcctgcc gcctgccctc cacacatccc tgtcccccca acccgggaac
1141 ccctgccctc ctccagcagg ccgcaccgcc cctggggccc cctgccagcc ccttcccagg
1201 ctgggagaca gcagaagaga tagaatcagg gctgccccca cagagtggga cccaaggggc
1261 taattggagg cacgagggga cccctcccca gggccttttc ctcctctgcg tcttccatct
1321 actgaaatgg gagagggggt ggggagcttc tgttctggtg aagggacccg ggcaggcccc
1381 cagcacccca tgctgacttg gagaacccca gatctctggg gcccagccag gcagggtgtg
1441 ggggcagctg tgccaatcta cctcacaggc ccaccccctg ccgggcatgc cgtgggatca
1501 tgggcaggga aggctctggg ggtcggagac accgctgctt agcaccccca gccagaacac
1561 cctgagggtc tcggggctct ggagagagtg gggcgggagg aagaattggc accttcctag
1621 ggaaggagac gagcgcttcg ccttgattct ccgagaagcc tccgagaagt gctttaagtg
1681 tgtttgcatg cgccaggcgg tgggcagcgg gggcctgtcc agccctctcc cgccatcctt
1741 ccccaagtga cgtccactgc cttgtcacca gcgacctgcc tgtcatgccc accccctgag
1801 gaagcatggg gaccctaaca ccctggtgcc ctgcaccaga caggccgtgg tcaggcccag
1861 gccaccggcc gggttctgcc acagcttccc acgtgcttgc tgacatgcgt gtgcctgtgt
1921 gtggtgtctg ttgctgtgtc gtgaaactgt gaccatcact cagtccaaac aagtgagtgg
1981 ccctcgaggc cacagttatg caactttcag tgtgtgtcat aacgacgtca ctgcttttta
2041 aactcgataa ctctttattt tagtaaaatg cccaggagtc ctggaagcta cgcggacttg
2101 cagaggtttt attttttggc cttagaatct gcagaaatta ggaggcaccg agcccagcgc
2161 agcagcctcg gacccggatt gcgtttgcct tagcggatat gtttatacag atgaatataa
2221 aatgtttttt tctttgggaa aaaaaaaaaa aaaaaaaaaa aaaaa
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