LOCUS BC014086 1330 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAP1A, member of RAS oncogene family, mRNA (cDNA clone
MGC:20027 IMAGE:4422971), complete cds.
ACCESSION BC014086
VERSION BC014086.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC014086.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331200.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000036511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20027 IMAGE:4422971"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1330
/gene="RAP1A"
/gene_synonym="KREV-1"
/gene_synonym="KREV1"
/gene_synonym="RAP1"
/gene_synonym="SMGP21"
/db_xref="GeneID:5906"
/db_xref="HGNC:HGNC:9855"
/db_xref="MIM:179520"
CDS 46..600
/gene="RAP1A"
/gene_synonym="KREV-1"
/gene_synonym="KREV1"
/gene_synonym="RAP1"
/gene_synonym="SMGP21"
/codon_start=1
/product="RAP1A, member of RAS oncogene family"
/protein_id="AAH14086.1"
/db_xref="GeneID:5906"
/db_xref="HGNC:HGNC:9855"
/db_xref="MIM:179520"
/translation="MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQV
EVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILR
VKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYD
LVRQINRKTPVEKKKPKKKSCLLL"
BASE COUNT 453 a 209 c 262 g 406 t
ORIGIN
1 aggcgccgga ccggggggat cgtcagtatt taaacagatc acatcatgcg tgagtacaag
61 ctagtggtcc ttggttcagg aggcgttggg aagtctgctc tgacagttca gtttgttcag
121 ggaatttttg ttgaaaaata tgacccaacg atagaagatt cctacagaaa gcaagttgaa
181 gtcgattgcc aacagtgtat gctcgaaatc ctggatactg cagggacaga gcaatttaca
241 gcaatgaggg atttgtatat gaagaacggc caaggttttg cactagtata ttctattaca
301 gctcagtcca cgtttaacga cttacaggac ctgagggaac agattttacg ggttaaggac
361 acggaagatg ttccaatgat tttggttggc aataaatgtg acctggaaga tgagcgagta
421 gttggcaaag agcagggcca gaatttagca agacagtggt gtaactgtgc ctttttagaa
481 tcttctgcaa agtcaaagat caatgttaat gagatatttt atgacctggt cagacagata
541 aataggaaaa caccagtgga aaagaagaag cctaaaaaga aatcatgtct gctgctctag
601 gcccatagtc agcagcagct ctgagccaga ttacaggaat gaagaactgt tgcctaattg
661 gaaagtgcca gcattccaga cttcaaaaat aaaaaatctg aagaggcttc tcctgtttta
721 tatattatgt gaagaattta gatcttatat tggtttgcac aagttccctg gagaaaaaaa
781 ttgctctgtg tatatctctt ggaaaataag acaatagtat ttctcctttg caatagcagt
841 tataacagat gtgaaaatat acttgactct aatatgatta tacaaaagag catggatgca
901 tttcaaatgt tagatattgc tactataatc aaatgatttc atattgatct ttttatcatg
961 atcctcccta tcaagcacta aaaagttgaa ccattatact ttatatctgt aatgatactg
1021 attatgaaat gtcccctcaa actcattgca gcagataact tttttgagtc attgacttca
1081 ttttatattt aaaaaattat ggaatatcat ctgtcattat attctaatta aaattgtgca
1141 taatgctttg gaaaaatggg tcttttatag gaaaaaaact gggataactg atttctatgg
1201 ctttcaaagc taaaatatat aatatactaa accaactcta atattgcttc ttgtgtttta
1261 ctgtcagatt aaattacagc ttttatggat gattaaattt tagtacattt tcaaaaaaaa
1321 aaaaaaaaaa
//